Protein–RNA interactions for Protein: Q9Y296

TRAPPC4, Trafficking protein particle complex subunit 4, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4Q9Y296 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC141257.3-201ENST00000572906 215 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 MIR4330-201ENST00000579077 105 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC090312.1-201ENST00000580637 348 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 AC090948.1-201ENST00000607464 549 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 MIR6820-201ENST00000611508 62 ntBASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRAPPC4Q9Y296 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 FAM3C2-201ENST00000312214 681 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC093719.1-202ENST00000392735 373 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 RPS20P14-201ENST00000412545 360 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AL512504.1-201ENST00000415494 778 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 RPL26P29-201ENST00000415623 438 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 MTCO1P45-201ENST00000431457 267 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 PPIAP17-201ENST00000438507 471 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AF228730.2-201ENST00000438784 848 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AL357520.1-201ENST00000441557 453 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 PGBD4P4-201ENST00000509673 613 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC067805.1-201ENST00000559344 470 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC021483.2-201ENST00000567415 758 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC015911.5-201ENST00000587076 451 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC025175.1-201ENST00000606482 759 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 Z98200.1-201ENST00000607298 470 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 LYRM2-211ENST00000626778 696 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 AC025031.4-201ENST00000621248 3271 ntBASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRAPPC4Q9Y296 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 MT-RNR1-201ENST00000389680 954 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 RN7SKP56-201ENST00000410513 331 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AMD1P2-201ENST00000412936 992 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 SNRPFP1-201ENST00000414761 252 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AL139095.3-201ENST00000419672 1203 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 RBMY1KP-201ENST00000423480 476 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 RPS26P47-201ENST00000427219 348 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 RN7SL98P-201ENST00000462271 300 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 STRADBP1-201ENST00000478954 1281 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC109458.1-201ENST00000508858 316 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 OR7E10P-201ENST00000526420 991 ntBASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC3.93□□□□□ -1.78
TRAPPC4Q9Y296 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 151.2 ms