Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC068254.2-201ENST00000623938 3577 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL589826.1-201ENST00000340697 249 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 RN7SKP224-201ENST00000364140 325 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 RNU6-452P-201ENST00000384406 107 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 MIR93-201ENST00000385024 80 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL356057.1-202ENST00000402263 756 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 ELOCP19-201ENST00000411919 318 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC073464.3-201ENST00000422564 712 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 CHIAP3-201ENST00000423668 1133 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 FAM204CP-201ENST00000424489 642 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 RSL24D1P6-201ENST00000426934 401 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 RPL12P28-201ENST00000430852 489 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 HMGB3P9-201ENST00000441799 583 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 EIF4A1P11-201ENST00000451239 222 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 HMGB1P26-201ENST00000452520 628 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 RPL23AP12-201ENST00000467573 473 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC091868.1-201ENST00000508746 304 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 RNU1-6P-201ENST00000516290 144 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 MIR5699-201ENST00000578903 90 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC008638.3-201ENST00000603341 463 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL590392.1-201ENST00000604960 446 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC010200.2-201ENST00000605098 235 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL356218.2-201ENST00000605264 187 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC025175.1-201ENST00000606482 759 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC110792.4-201ENST00000609843 298 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL121873.1-201ENST00000616013 524 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL356490.1-201ENST00000623079 479 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AC015726.3-201ENST00000624501 418 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 MIR6830-201ENST00000636015 70 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 AL592148.3-201ENST00000608771 2646 ntBASIC4.24□□□□□ -1.73
RNF6Q9Y252 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF6Q9Y252 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF6Q9Y252 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF6Q9Y252 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF6Q9Y252 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF6Q9Y252 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF6Q9Y252 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 RNA5SP447-201ENST00000363749 119 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF6Q9Y252 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 RNA5SP397-201ENST00000391323 118 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF6Q9Y252 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 RNA5SP104-201ENST00000410989 118 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 OR51B3P-201ENST00000412287 913 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 MTND4P24-201ENST00000424002 397 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 SKP1P3-201ENST00000429280 487 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 EIF2S2P2-201ENST00000447161 982 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 MTND5P8-201ENST00000449817 1083 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 APOOP2-201ENST00000461561 539 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 RN7SKP122-201ENST00000515923 296 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 HAUS1P3-201ENST00000523909 662 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 AC004923.2-201ENST00000529649 369 ntBASIC4.23□□□□□ -1.73
RNF6Q9Y252 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
RNF6Q9Y252 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms