Protein–RNA interactions for Protein: Q9UPP1

PHF8, Histone lysine demethylase PHF8, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8Q9UPP1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC8.9□□□□□ -0.98
PHF8Q9UPP1 RNA5SP340-201ENST00000517132 107 ntBASIC8.9□□□□□ -0.98
PHF8Q9UPP1 IGHVIII-76-1-201ENST00000523776 286 ntBASIC8.9□□□□□ -0.98
PHF8Q9UPP1 AP000620.1-201ENST00000527147 504 ntBASIC8.9□□□□□ -0.98
PHF8Q9UPP1 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC8.9□□□□□ -0.98
PHF8Q9UPP1 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC8.9□□□□□ -0.98
PHF8Q9UPP1 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC8.9□□□□□ -0.98
PHF8Q9UPP1 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC8.9□□□□□ -0.98
PHF8Q9UPP1 MTCO3P23-201ENST00000561363 289 ntBASIC8.9□□□□□ -0.98
PHF8Q9UPP1 FAM106CP-201ENST00000582212 507 ntBASIC8.9□□□□□ -0.98
PHF8Q9UPP1 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC8.9□□□□□ -0.98
PHF8Q9UPP1 AC100812.1-201ENST00000607622 580 ntBASIC8.9□□□□□ -0.98
PHF8Q9UPP1 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
PHF8Q9UPP1 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC8.9□□□□□ -0.98
PHF8Q9UPP1 RUNX1T1-201ENST00000265814 7284 ntAPPRIS P3 TSL 5 BASIC8.9□□□□□ -0.99
PHF8Q9UPP1 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
PHF8Q9UPP1 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
PHF8Q9UPP1 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC8.9□□□□□ -0.99
PHF8Q9UPP1 B3GNT2-202ENST00000405767 2436 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
PHF8Q9UPP1 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
PHF8Q9UPP1 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
PHF8Q9UPP1 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AL353807.3-201ENST00000500626 2505 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 ZNF807-201ENST00000328088 1707 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 RNU6ATAC23P-201ENST00000408448 123 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 METTL15P3-201ENST00000415522 1221 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AC079355.1-201ENST00000421770 223 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 Y_RNA.653-201ENST00000459091 95 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 SLC25A51P1-201ENST00000468432 871 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AC083904.1-201ENST00000487828 231 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 OR4D12P-201ENST00000509361 911 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 SNORA74.4-201ENST00000607595 199 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 DTNA-225ENST00000595022 6016 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 AC112255.1-201ENST00000624070 2493 ntBASIC8.89□□□□□ -0.99
PHF8Q9UPP1 DCAF10-201ENST00000242323 7393 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
PHF8Q9UPP1 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 LINC01441-201ENST00000433766 2290 ntTSL 2 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 ASNSP3-201ENST00000451989 1306 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 ZMYM4-201ENST00000314607 6994 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RNU6-115P-201ENST00000364310 107 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RNU6-169P-201ENST00000365336 107 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 MIR514A2-201ENST00000385131 88 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 MIR514A3-201ENST00000385132 88 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RNU6-193P-201ENST00000410977 107 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RNU6-1304P-201ENST00000411374 106 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 ATP5LP2-201ENST00000440646 311 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC073415.1-201ENST00000449240 153 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RN7SL643P-201ENST00000471845 291 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RPS27P23-201ENST00000487608 251 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RPL32P9-201ENST00000487963 407 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC091885.1-201ENST00000506658 268 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 KHDC1P1-201ENST00000511053 508 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC021146.1-201ENST00000511202 716 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 RNU4-29P-201ENST00000515943 174 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC105031.1-201ENST00000518550 476 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC073539.2-201ENST00000597113 165 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AP001521.1-201ENST00000609150 300 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC018926.3-201ENST00000618841 406 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AL354718.1-201ENST00000619764 589 ntBASIC8.88□□□□□ -0.99
PHF8Q9UPP1 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC8.88□□□□□ -0.99
PHF8Q9UPP1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms