Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 FTLP6-201ENST00000355274 422 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 RNA5SP293-201ENST00000410527 113 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 AC096644.3-201ENST00000416788 338 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 RPL5P2-201ENST00000429598 854 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 AC005019.1-201ENST00000436455 431 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 AC025750.2-201ENST00000442609 450 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 AC090686.1-201ENST00000481577 749 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 AC108145.1-201ENST00000503770 153 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 HIGD1AP3-201ENST00000515857 278 ntBASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 MEG8-215ENST00000555354 469 ntTSL 3 BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC6.32□□□□□ -1.4
RIMBP3Q9UFD9 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 AL133383.2-201ENST00000622958 2336 ntBASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 HMGB3P19-201ENST00000403971 560 ntBASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 UBDP1-202ENST00000457888 382 ntBASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 RNU6-237P-201ENST00000515985 71 ntBASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 MIR7112-201ENST00000616126 65 ntBASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 AC005005.4-201ENST00000623789 16698 ntBASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 AL359922.3-201ENST00000624779 1670 ntBASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RIMBP3Q9UFD9 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 CCAT2-201ENST00000630920 1752 ntBASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 AC073063.1-201ENST00000434352 607 ntBASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 AC080014.1-201ENST00000496877 1201 ntBASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 AC027216.1-201ENST00000577726 685 ntBASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 AC026368.1-201ENST00000614934 690 ntBASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.3□□□□□ -1.4
RIMBP3Q9UFD9 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 STAG2-201ENST00000218089 5218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 MIR1911-201ENST00000410783 80 ntBASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 PHBP14-201ENST00000512887 367 ntBASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 FRG1EP-201ENST00000634469 770 ntBASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RIMBP3Q9UFD9 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 COTL1P1-201ENST00000422309 375 ntBASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 IGKV1OR-3-201ENST00000446944 348 ntBASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 AC068790.5-201ENST00000602741 355 ntBASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 AP000473.2-201ENST00000602659 1537 ntBASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RIMBP3Q9UFD9 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms