Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 MTND4P8-201ENST00000514997 1362 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AL049697.2-201ENST00000403708 294 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 SNORA11C-201ENST00000408532 129 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 MIR1303-201ENST00000408625 86 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 RN7SKP106-201ENST00000410832 272 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC107081.1-201ENST00000414975 361 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 LINC00993-201ENST00000420453 540 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AL136231.1-201ENST00000429407 730 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 MTCO3P21-201ENST00000430791 643 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC022431.1-201ENST00000450941 438 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 RN7SL517P-201ENST00000462240 305 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 RN7SL346P-201ENST00000491561 294 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC073358.1-201ENST00000505671 684 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 OR51K1P-201ENST00000510214 950 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 VBP1-203ENST00000535916 944 ntTSL 2 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 MIR378J-201ENST00000611988 109 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC231759.1-201ENST00000616455 597 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC048344.4-201ENST00000619744 527 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 AP002791.1-201ENST00000623291 381 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AC020633.1-201ENST00000468439 2247 ntBASIC5.48□□□□□ -1.53
COL20A1Q9P218 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
COL20A1Q9P218 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
COL20A1Q9P218 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC138393.1-206ENST00000540997 1886 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 MTND4P10-201ENST00000446199 1363 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 RNU6-317P-201ENST00000384031 107 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 TRGV6-201ENST00000417928 299 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 RPS17P8-201ENST00000434525 335 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC234064.1-201ENST00000436312 247 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AP000936.3-201ENST00000438127 255 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 MTCYBP11-201ENST00000447254 1109 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 TPT1P13-201ENST00000449760 499 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 DNAJC19P8-201ENST00000452887 259 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AL356981.1-201ENST00000454879 684 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 SEPT7P3-201ENST00000455017 621 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC093166.2-201ENST00000455969 1017 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC011037.1-201ENST00000483964 558 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC113347.3-201ENST00000509113 148 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC010306.1-201ENST00000523223 1117 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC005868.1-201ENST00000536421 331 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AL110118.1-201ENST00000553543 400 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
COL20A1Q9P218 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC090695.1-201ENST00000561269 1222 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC090312.2-201ENST00000582687 378 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC061975.8-201ENST00000587058 721 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC097065.2-201ENST00000608159 533 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC099676.1-201ENST00000608886 657 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 MIR6798-201ENST00000612887 67 ntBASIC5.47□□□□□ -1.53
COL20A1Q9P218 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.47□□□□□ -1.53
COL20A1Q9P218 MIR7641-1-201ENST00000627518 61 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms