Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC092013.1-201ENST00000438795 332 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 RPL12P3-201ENST00000440080 396 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC074386.1-201ENST00000476560 767 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 NDUFA5P12-201ENST00000503796 343 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 FAM60CP-201ENST00000591086 664 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 MIR6780A-201ENST00000615089 68 ntBASIC3.95□□□□□ -1.78
VAPAQ9P0L0 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VAPAQ9P0L0 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 RNA5SP36-201ENST00000410197 133 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 RN7SKP222-201ENST00000410651 315 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 NRBF2P2-201ENST00000413087 861 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 MTND2P11-201ENST00000423638 648 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 USP9YP9-201ENST00000429406 715 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC011742.1-201ENST00000431448 434 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 IFNWP4-201ENST00000453148 294 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 BLNK-209ENST00000495266 440 ntTSL 5 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 RPL31P61-201ENST00000496160 376 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC008638.1-201ENST00000506035 866 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 IGLVIV-65-201ENST00000517313 360 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC008536.1-201ENST00000602872 669 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC017076.1-201ENST00000607613 578 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 OR6R2P-201ENST00000609216 300 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 NF1P10-201ENST00000613227 742 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AL645927.2-201ENST00000618350 349 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AP006248.2-201ENST00000623309 592 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AC092159.4-201ENST00000624944 550 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AP005264.7-201ENST00000625003 745 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 PHKBP1-201ENST00000450951 1951 ntBASIC3.94□□□□□ -1.78
VAPAQ9P0L0 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VAPAQ9P0L0 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 RNU1-14P-201ENST00000362759 152 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 RNU6-1251P-201ENST00000364502 107 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 PGBD4P8-201ENST00000412993 562 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 UBE2V2P1-201ENST00000434717 398 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 PHBP16-201ENST00000446318 950 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AL513533.1-201ENST00000453728 415 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 RNU6-1218P-201ENST00000458990 108 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 SYT14P1-201ENST00000481459 721 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AL592156.1-201ENST00000508758 304 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 TRAV8-5-201ENST00000537369 341 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AC079171.1-201ENST00000568788 914 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 HNRNPCP4-201ENST00000571636 900 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC3.93□□□□□ -1.78
VAPAQ9P0L0 PSMA6P4-201ENST00000603247 718 ntBASIC3.93□□□□□ -1.78
VAPAQ9P0L0 AL773545.4-201ENST00000637262 310 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 90.1 ms