Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.48
VTA1Q9NP79 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
VTA1Q9NP79 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.84□□□□□ -1.48
VTA1Q9NP79 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
VTA1Q9NP79 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
VTA1Q9NP79 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.84□□□□□ -1.48
VTA1Q9NP79 AC012618.3-205ENST00000637896 1496 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 HSPA8P14-201ENST00000552265 1805 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 ADAM24P-201ENST00000398655 2101 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 RNA5SP428-201ENST00000365129 132 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 RNU1-74P-201ENST00000384108 171 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 TEX41-202ENST00000414256 604 ntTSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 AL139421.1-201ENST00000423010 169 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 RPL21P43-201ENST00000425440 472 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 MGAT2P2-201ENST00000427194 797 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 RPL12P18-201ENST00000437175 325 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 PPIAP17-201ENST00000438507 471 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 MTCYBP34-201ENST00000439552 670 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 UBE2V1P5-201ENST00000440070 405 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 RPL34P20-201ENST00000442771 351 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 MTND5P2-201ENST00000442927 1142 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 YWHAQP9-201ENST00000445891 512 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 TPMTP4-201ENST00000450749 678 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 LINC00888-204ENST00000487386 421 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 RN7SL244P-201ENST00000493405 297 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC140172.1-201ENST00000502928 141 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 MTCYBP16-201ENST00000509187 1129 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC116353.3-201ENST00000511215 249 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 HMGN1P9-201ENST00000515212 298 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC105185.1-201ENST00000518705 535 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 IGKV2-36-201ENST00000519999 223 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 HIGD1AP5-201ENST00000529959 259 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 ELOCP32-201ENST00000548625 324 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 NDUFAF4P1-201ENST00000559425 519 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC090888.1-201ENST00000561335 1141 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC015726.1-201ENST00000602353 681 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC025857.2-201ENST00000602711 238 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AL031281.1-201ENST00000604049 488 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AP003973.1-201ENST00000604639 691 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC080013.3-201ENST00000606839 578 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AL451074.6-201ENST00000608512 729 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AP004247.3-201ENST00000608682 624 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC100847.1-201ENST00000611316 481 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC015726.3-201ENST00000624501 418 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC005618.4-201ENST00000625053 554 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 ZNRD1ASP-221ENST00000637794 1074 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 SGO1P2-201ENST00000429458 1589 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 AC093775.1-201ENST00000624154 1868 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 OR9K1P-202ENST00000641111 3217 ntBASIC5.83□□□□□ -1.48
VTA1Q9NP79 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.83□□□□□ -1.48
VTA1Q9NP79 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VTA1Q9NP79 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VTA1Q9NP79 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 AP000776.1-201ENST00000530032 1663 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 AC133552.1-201ENST00000569988 4007 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.82□□□□□ -1.48
VTA1Q9NP79 SNORD116-1-201ENST00000384335 95 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 RSL24D1P4-201ENST00000400938 484 ntBASIC5.82□□□□□ -1.48
VTA1Q9NP79 Z97832.1-201ENST00000402490 328 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 128.9 ms