Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC093151.1-201ENST00000427711 313 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AP001324.1-201ENST00000428553 399 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 PPIAP17-201ENST00000438507 471 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 DNAJC19P8-201ENST00000452887 259 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 RPL12P25-201ENST00000455592 494 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 ELOCP24-201ENST00000456370 334 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC091885.1-201ENST00000506658 268 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC018797.3-201ENST00000513388 1241 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 SNORA25.10-201ENST00000515926 124 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 SCARNA5-201ENST00000516201 276 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 Vault.3-201ENST00000516676 95 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AP003181.2-201ENST00000528941 181 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC110743.1-201ENST00000584870 478 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 FKBP1AP1-201ENST00000594588 318 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 SSX2B-202ENST00000596480 1291 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AL359704.2-201ENST00000604335 521 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AL133173.2-201ENST00000614270 90 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 OR2L1P-202ENST00000641567 1023 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC007998.4-201ENST00000612496 2533 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 CEACAM5-203ENST00000405816 2354 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 PHLDB2-202ENST00000393925 5543 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC020978.8-201ENST00000571975 3022 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 RBM25-201ENST00000261973 6910 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 TRIM55-202ENST00000315962 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 AC244100.2-202ENST00000612584 3878 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 CWF19L1-201ENST00000354105 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 MTND5P19-201ENST00000424872 1794 ntBASIC6.62□□□□□ -1.35
COL25A1Q9BXS0 ZNF812P-201ENST00000457674 1694 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 RRM2-201ENST00000304567 3271 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC007993.1-201ENST00000621298 2430 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 MTCO1P14-201ENST00000441695 1559 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 ADGRE1-201ENST00000250572 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 SPATA31A7-206ENST00000619167 4256 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 FAM32BP-201ENST00000344033 333 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 Y_RNA.153-201ENST00000363615 91 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 RNU6-99P-201ENST00000364721 107 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 CD3D-202ENST00000392884 476 ntTSL 2 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AP004243.1-202ENST00000398983 969 ntTSL 5 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 RPS16P5-201ENST00000406501 404 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 DPH3P2-201ENST00000422618 250 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC018865.2-201ENST00000423631 129 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 PRPF38AP2-201ENST00000438179 851 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 RPS11P7-201ENST00000442125 465 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 GAPDHP23-201ENST00000444823 993 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AL161722.1-201ENST00000446972 1032 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 RPL26P28-201ENST00000451325 435 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 BTF3P5-201ENST00000457252 467 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 RN7SL180P-201ENST00000466769 294 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC092324.1-201ENST00000468671 324 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 RPSAP50-201ENST00000481955 852 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC233702.1-201ENST00000482905 502 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 GZMAP1-201ENST00000503054 631 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC133644.2-201ENST00000608142 540 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 MIR6085-201ENST00000618314 110 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 AC141273.2-201ENST00000618989 130 ntBASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC6.61□□□□□ -1.35
COL25A1Q9BXS0 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 166.1 ms