Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MIR4691-201ENST00000583764 85 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC005191.1-201ENST00000603950 358 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 COX6CP4-201ENST00000605798 228 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AL512329.2-201ENST00000607350 548 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC016542.1-201ENST00000608259 493 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC140113.4-201ENST00000622087 222 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 AC067931.1-201ENST00000624190 671 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 ERCC6-202ENST00000374127 1782 ntBASIC4.58□□□□□ -1.68
VPS33AQ96AX1 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
VPS33AQ96AX1 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 KPNA2P2-201ENST00000419546 1489 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 RNA5SP428-201ENST00000365129 132 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AL035405.1-201ENST00000400795 710 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AL021331.1-201ENST00000402817 582 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 PRRC2CP1-201ENST00000404428 159 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 RNU6-77P-201ENST00000410554 91 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 VDAC1P9-201ENST00000412766 841 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 PRELID3BP11-201ENST00000414230 479 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 OR2X1P-201ENST00000421144 687 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 CHEK2P5-201ENST00000423877 246 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 RPS17P8-201ENST00000434525 335 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 RPL23AP56-201ENST00000460778 453 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 RN7SL222P-201ENST00000476452 299 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC090114.3-201ENST00000479267 829 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 RN7SL319P-201ENST00000480656 221 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 MIR4789-201ENST00000577469 82 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 MIR4458-201ENST00000578872 75 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 RPL26P30-202ENST00000602923 645 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC115621.1-201ENST00000604653 858 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC004232.3-201ENST00000622977 525 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AL359757.1-201ENST00000623176 255 ntBASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 TEX41-254ENST00000626394 423 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.57□□□□□ -1.68
VPS33AQ96AX1 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC025125.1-201ENST00000624743 1922 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC018529.3-201ENST00000624212 2254 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 RAET1L-202ENST00000367341 1285 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 MIR195-201ENST00000385194 87 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 U3.36-201ENST00000408418 213 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 RPL21P108-201ENST00000413857 481 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 GAPDHP49-201ENST00000421421 961 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 RPL7P57-201ENST00000423238 740 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 FO393414.1-201ENST00000428697 1184 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 RPS26P30-201ENST00000443431 335 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AL050341.1-201ENST00000447743 313 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 MYO5BP2-201ENST00000449815 1277 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 OR51B8P-201ENST00000449892 769 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC233982.1-201ENST00000451247 436 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 RPL21P18-201ENST00000469899 480 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 RN7SL174P-201ENST00000475578 289 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC117394.1-201ENST00000477323 567 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC104109.1-201ENST00000498563 436 ntBASIC4.56□□□□□ -1.68
VPS33AQ96AX1 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC4.56□□□□□ -1.68
VPS33AQ96AX1 AC005351.1-201ENST00000511152 786 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 75.1 ms