Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 MOB1AP1-201ENST00000430903 535 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC016712.1-201ENST00000431088 378 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 CETN4P-201ENST00000432407 469 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC091390.1-201ENST00000433904 331 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC093414.1-201ENST00000434712 514 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 UBE2V1P5-201ENST00000440070 405 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 TXNP5-201ENST00000441043 315 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 MRPL42P4-201ENST00000453267 443 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC091180.1-201ENST00000462104 372 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 RN7SL814P-201ENST00000487715 300 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC023632.1-201ENST00000518463 375 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 MRPS36P3-201ENST00000519284 130 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC020937.1-201ENST00000519677 1013 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 COX6B1P6-201ENST00000522347 255 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC138832.1-201ENST00000522871 556 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 MTCO2P15-201ENST00000532655 656 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC023538.1-201ENST00000534576 736 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 MIR5708-201ENST00000579723 85 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC011453.2-201ENST00000603737 729 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC025588.2-201ENST00000604851 466 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL391358.1-201ENST00000605342 190 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL592148.2-201ENST00000612210 372 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL158163.2-201ENST00000619110 700 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC125336.1-201ENST00000508893 2827 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 FTX-210ENST00000603037 8347 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC006210.2-201ENST00000367074 1545 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 RN7SKP145-201ENST00000363291 303 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 SNORA70.10-201ENST00000384515 134 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 SNORA40.2-201ENST00000390847 128 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 HMGB1P49-201ENST00000418882 569 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 MTND2P16-201ENST00000419987 799 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC009480.2-201ENST00000422916 432 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC068287.1-201ENST00000430283 295 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 RPL21P110-201ENST00000433345 446 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 PPIAP13-201ENST00000434706 478 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC099063.2-201ENST00000446360 662 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 TPT1P12-201ENST00000448968 492 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 TPMTP4-201ENST00000450749 678 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AL513533.1-201ENST00000453728 415 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC096992.1-201ENST00000459808 709 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC090602.1-201ENST00000469695 252 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC118282.2-201ENST00000508739 374 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC113347.3-201ENST00000509113 148 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 TBCA-203ENST00000517679 545 ntTSL 3 BASIC5.04□□□□□ -1.6
HMGB4Q8WW32 AC008562.1-201ENST00000521763 330 ntBASIC5.04□□□□□ -1.6
HMGB4Q8WW32 C1GALT1P3-201ENST00000522049 819 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms