Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 C6orf48-208ENST00000395788 815 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 HMGB3P18-201ENST00000406327 590 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 RN7SKP286-201ENST00000410894 299 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AL035410.1-201ENST00000427409 427 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 TUBB4BP6-201ENST00000437576 479 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 SUMO2P3-201ENST00000438311 288 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC064862.4-201ENST00000442180 334 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AP000281.1-201ENST00000444036 316 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 RPS27AP3-201ENST00000453803 454 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 snoU109.1-201ENST00000459339 135 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 RN7SL284P-201ENST00000498823 275 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 NDUFB4P2-201ENST00000509515 391 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 OR6C73P-201ENST00000546432 358 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC137768.1-201ENST00000549998 553 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AL359212.1-201ENST00000556608 614 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 SNORD95-201ENST00000579879 68 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AP001004.1-201ENST00000582468 324 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 NRBF2P5-201ENST00000603087 788 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 MTCO2P22-201ENST00000603246 681 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 TAS2R6P-201ENST00000605022 826 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC015722.2-201ENST00000622210 551 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC079228.1-201ENST00000624774 1049 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 CRYM-AS1-204ENST00000637983 556 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC087516.1-201ENST00000561236 2428 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 AC015799.1-201ENST00000622996 3122 ntBASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
SHKBP1Q8TBC3 ZNF33BP1-201ENST00000452497 1834 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 Y_RNA.431-201ENST00000384086 102 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 MIR142-201ENST00000384835 87 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 SNORA75.4-201ENST00000391278 119 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 SNRPEP6-201ENST00000407465 277 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 SNORA11B-201ENST00000408175 129 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 GPM6BP2-201ENST00000432046 144 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 ACTR3P2-201ENST00000439585 1257 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 IPO7P1-201ENST00000442031 636 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 YWHAQP9-201ENST00000445891 512 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 GPM6BP1-201ENST00000446387 144 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AL157827.1-201ENST00000447622 132 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AL359091.1-201ENST00000449048 1734 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 SNRPGP6-201ENST00000451124 220 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC091544.1-201ENST00000484702 348 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 HMGB1P29-201ENST00000505659 499 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC112191.2-201ENST00000522428 333 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC020661.2-201ENST00000560114 134 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 NIFKP8-201ENST00000560500 874 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC107954.1-201ENST00000565906 727 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC025678.1-201ENST00000567861 338 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AL163952.1-202ENST00000569625 600 ntBASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.29□□□□□ -1.4
SHKBP1Q8TBC3 AL352984.2-201ENST00000611153 546 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms