Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL136164.3-201ENST00000624429 3978 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC3□□□□□ -1.93
SCXQ7RTU7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCXQ7RTU7 AC009643.2-201ENST00000603543 1448 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 Z82217.1-201ENST00000625157 8149 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 AC139713.2-214ENST00000642059 1811 ntBASIC3□□□□□ -1.93
SCXQ7RTU7 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3□□□□□ -1.93
SCXQ7RTU7 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
SCXQ7RTU7 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SCXQ7RTU7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC026951.1-201ENST00000559530 2459 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 ST7-212ENST00000422922 1887 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL592148.3-201ENST00000608771 2646 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SCXQ7RTU7 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
SCXQ7RTU7 RNU1-20P-201ENST00000363314 162 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 RNU6-618P-201ENST00000363518 112 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 SNORA70.2-201ENST00000364506 135 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL139039.2-201ENST00000407436 479 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 GSTM3P2-201ENST00000412746 530 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC140479.3-201ENST00000418944 1126 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 VN1R37P-201ENST00000419096 748 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 UQCRBP1-201ENST00000421129 336 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 RPL7P53-201ENST00000421245 739 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 RGS17P1-201ENST00000423358 553 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL451139.1-201ENST00000434718 346 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC073143.1-201ENST00000436316 395 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 GSTA7P-201ENST00000438425 448 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL162591.2-201ENST00000449634 317 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC079168.2-201ENST00000453977 416 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC010374.1-201ENST00000503762 1237 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 ATP6V1G1P6-201ENST00000504007 334 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 IGBP1P5-201ENST00000507524 1000 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC093840.1-201ENST00000511599 336 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL352979.3-201ENST00000553515 247 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 PARP1P2-201ENST00000556806 195 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 ATP5J2P6-201ENST00000565203 266 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 RN7SL652P-201ENST00000577769 300 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC069061.3-201ENST00000582254 823 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL049844.2-201ENST00000604280 628 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 HMGB1P51-201ENST00000605166 638 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC073137.1-201ENST00000605636 634 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AC055764.2-201ENST00000610089 670 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL121873.1-201ENST00000616013 524 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL669942.2-201ENST00000620352 697 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
SCXQ7RTU7 LINC02471-203ENST00000641941 4752 ntBASIC2.99□□□□□ -1.93
SCXQ7RTU7 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCXQ7RTU7 AL359922.3-201ENST00000624779 1670 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 SUPT16HP1-201ENST00000537175 3133 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCXQ7RTU7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
SCXQ7RTU7 AC008549.2-201ENST00000333482 706 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 MIR448-201ENST00000362131 111 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 RNA5SP447-201ENST00000363749 119 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 GCNT6-201ENST00000379591 934 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 U3.22-201ENST00000391120 215 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 Z98745.1-201ENST00000402553 494 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 AL078604.1-201ENST00000404609 466 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC2.98□□□□□ -1.93
SCXQ7RTU7 SLC4A1APP1-201ENST00000419995 602 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 PDSS1P1-201ENST00000422953 1114 ntBASIC2.98□□□□□ -1.93
SCXQ7RTU7 RPEP3-201ENST00000425462 676 ntBASIC2.98□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms