Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 PRELID3BP11-201ENST00000414230 479 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 AC091021.1-201ENST00000468051 388 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 RN7SL306P-201ENST00000492941 296 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 RNU6-307P-201ENST00000516743 106 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 SCARNA18.2-201ENST00000516882 84 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 AC125612.1-201ENST00000547580 377 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 MIR4703-201ENST00000577728 79 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 MIR5583-1-201ENST00000580941 59 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 AC025162.2-201ENST00000619602 560 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 NRXN3-201ENST00000281127 8504 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 VMA21-201ENST00000330374 4717 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 CELF2-203ENST00000416382 6894 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 FBXO36-202ENST00000373652 3120 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 NHEJ1-202ENST00000409720 1954 ntTSL 5 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 PDE1A-201ENST00000351439 2338 ntTSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 RSPH4A-201ENST00000229554 2825 ntAPPRIS P1 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.73□□□□□ -1.17
VARS2Q5ST30 SALL1P1-201ENST00000438101 3837 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 SP140-205ENST00000420434 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC7.73□□□□□ -1.17
VARS2Q5ST30 AL133320.1-201ENST00000621423 2352 ntBASIC7.73□□□□□ -1.17
VARS2Q5ST30 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 ZNF101-208ENST00000592502 4627 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 ESRP1-201ENST00000358397 3756 ntAPPRIS ALT1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 CYP4F30P-203ENST00000438109 2250 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 PCNX1-201ENST00000304743 12919 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 USP29-201ENST00000254181 3705 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 SEMA6A-210ENST00000510263 3292 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 Y_RNA.22-201ENST00000362492 102 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RNA5SP114-201ENST00000363780 113 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 Y_RNA.237-201ENST00000364439 102 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 SNORA41-201ENST00000384675 132 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RN7SKP86-201ENST00000410454 332 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RPL34P19-201ENST00000415903 342 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 BX284632.2-201ENST00000421091 399 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 RPL21P112-201ENST00000434403 463 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AQP4-203ENST00000440832 1169 ntTSL 5 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 RPSAP40-201ENST00000442343 891 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AL359955.2-201ENST00000445380 353 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 BTF3P6-201ENST00000448054 499 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC006026.3-201ENST00000454029 143 ntTSL 3 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 RPS20P32-201ENST00000456044 356 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 SRP68P2-201ENST00000456184 254 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RN7SL180P-201ENST00000466769 294 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC087879.1-201ENST00000474343 374 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AL117692.1-201ENST00000494283 713 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 YWHAEP4-201ENST00000505390 198 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 RNA5SP518-201ENST00000515957 119 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RNU6-397P-201ENST00000516226 104 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RNU6-1004P-201ENST00000516584 111 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RNU6-919P-201ENST00000516731 104 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RAB9BP1-201ENST00000519581 626 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 OR11H5P-201ENST00000554039 926 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 UBE2CP1-201ENST00000557130 554 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 SUB1P3-201ENST00000564581 315 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC090651.1-201ENST00000567865 634 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RN7SL667P-201ENST00000582817 298 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 MIR4310-201ENST00000582950 57 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC011891.2-201ENST00000604949 397 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 AL136097.3-201ENST00000611097 505 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 AL365222.1-201ENST00000614661 98 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 EFCAB8-204ENST00000618684 435 ntTSL 5 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 AC012629.3-201ENST00000623397 328 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC7.72□□□□□ -1.17
VARS2Q5ST30 MKI67P1-201ENST00000604297 1460 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 TNFSF15-201ENST00000374044 2789 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 MAPK10-377ENST00000642006 2752 ntBASIC7.72□□□□□ -1.17
VARS2Q5ST30 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
VARS2Q5ST30 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 158.7 ms