Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AL160287.1-201ENST00000455612 432 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC073522.1-201ENST00000483312 377 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 IGLV2-34-201ENST00000490007 283 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC008897.1-201ENST00000494006 347 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 RPS17P5-201ENST00000498293 408 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 RNU6-416P-201ENST00000516265 103 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 RAB9BP1-201ENST00000519581 626 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 IGJP1-201ENST00000522682 475 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 MTND4LP24-201ENST00000572277 291 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 MIR4675-201ENST00000577898 77 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 EIF1P6-201ENST00000600054 334 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC068790.2-201ENST00000602601 557 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC008121.2-201ENST00000614647 523 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 AC026585.1-201ENST00000619582 524 ntBASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SLC44A4Q53GD3 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC083843.3-201ENST00000623679 2186 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC119751.3-201ENST00000399720 670 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 ERHP2-201ENST00000402323 299 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AL590084.1-201ENST00000407885 387 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 SNORA11C-201ENST00000408532 129 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 RNU6-77P-201ENST00000410554 91 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 RNU6-575P-201ENST00000411326 105 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC002524.1-201ENST00000411687 547 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 NPM1P33-201ENST00000438918 872 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AL138878.2-201ENST00000440581 1241 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 HMGB1P4-201ENST00000455362 567 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 NECAP1P2-201ENST00000455668 727 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 PRDX3P4-201ENST00000470828 747 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC034244.1-201ENST00000507687 207 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC138938.1-201ENST00000515431 782 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC023632.1-201ENST00000518463 375 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AP003033.1-201ENST00000527244 415 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC124293.1-201ENST00000530034 493 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC122688.1-201ENST00000541494 223 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC023050.2-201ENST00000544968 387 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC092747.2-201ENST00000545069 983 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 MTCYBP33-201ENST00000575007 1130 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AP003392.5-201ENST00000607857 415 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 MIR7973-1-201ENST00000614683 76 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 AL162574.1-201ENST00000615702 950 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 MIR6133-201ENST00000617057 108 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 DDX43P2-201ENST00000604753 1354 ntBASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SLC44A4Q53GD3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
SLC44A4Q53GD3 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms