Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 AC126915.2-201ENST00000610957 190 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC009318.3-201ENST00000616916 503 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AL359757.1-201ENST00000623176 255 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 AC007671.2-201ENST00000637344 619 ntBASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CCDC144BQ3MJ40 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 MIR585-201ENST00000384887 94 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 MIR551A-201ENST00000385042 96 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 MIR765-201ENST00000390226 114 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL590084.2-201ENST00000401481 382 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 FABP12P1-201ENST00000401911 322 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 RN7SKP125-201ENST00000410481 302 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 RN7SKP213-201ENST00000410746 298 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 FCF1P2-201ENST00000415284 583 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC004074.1-201ENST00000421810 1063 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 MTCO3P1-205ENST00000422088 832 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 IFNNP1-201ENST00000429219 553 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL136231.1-201ENST00000429407 730 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC010881.1-201ENST00000433830 235 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC023347.2-201ENST00000433994 462 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC090018.1-201ENST00000434369 367 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 RSL24D1P3-201ENST00000449255 495 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 OR52A4P-201ENST00000472867 958 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 RPL7AP6-201ENST00000477943 801 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 RNU4ATAC18P-201ENST00000516179 126 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC090888.1-201ENST00000561335 1141 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC074051.3-201ENST00000570238 358 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AC116651.1-201ENST00000609724 556 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AP000676.3-201ENST00000623299 569 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AP002505.2-201ENST00000623585 696 ntBASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CCDC144BQ3MJ40 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 OFD1P5Y-201ENST00000447585 2590 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 Y_RNA.25-201ENST00000362528 102 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 U3.2-201ENST00000362981 210 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 HYKK-202ENST00000408962 847 ntTSL 5 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 LUZP4P1-201ENST00000415420 344 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AL390023.1-201ENST00000428836 262 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 MTCYBP3-201ENST00000445588 1137 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AL591363.1-201ENST00000450091 483 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 EIF4A1P11-201ENST00000451239 222 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 RPL12P26-201ENST00000452430 487 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 AL035090.1-201ENST00000454835 332 ntBASIC6.28□□□□□ -1.4
CCDC144BQ3MJ40 ANK3-207ENST00000460468 677 ntTSL 3 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.8 ms