Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RPL32P9-201ENST00000487963 407 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
RFX4Q33E94 AC146944.2-203ENST00000502493 354 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 BNIP3P41-201ENST00000503774 571 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 NDUFA5P12-201ENST00000503796 343 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC139495.1-202ENST00000513164 354 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX4Q33E94 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC3.97□□□□□ -1.77
RFX4Q33E94 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.97□□□□□ -1.77
RFX4Q33E94 HNRNPCP4-201ENST00000571636 900 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC245128.3-201ENST00000594721 748 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC004948.1-201ENST00000609858 672 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC064801.1-201ENST00000612025 407 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AL133243.1-201ENST00000614487 366 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.97□□□□□ -1.77
RFX4Q33E94 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX4Q33E94 RMST_5.1-201ENST00000618704 126 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.97□□□□□ -1.77
RFX4Q33E94 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.97□□□□□ -1.77
RFX4Q33E94 FP325313.1-201ENST00000638228 703 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.97□□□□□ -1.77
RFX4Q33E94 AL031985.3-201ENST00000565390 2449 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 PNPT1P2-201ENST00000456768 2050 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 AC114546.3-201ENST00000623582 1734 ntBASIC3.97□□□□□ -1.77
RFX4Q33E94 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC3.97□□□□□ -1.77
RFX4Q33E94 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.97□□□□□ -1.77
RFX4Q33E94 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC3.96□□□□□ -1.77
RFX4Q33E94 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 RNA5SP322-201ENST00000363617 119 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX4Q33E94 RNU6-1279P-201ENST00000383917 103 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 RNA5SP87-201ENST00000384155 118 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 RNU6-146P-201ENST00000384602 108 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 MIR3065-201ENST00000390137 79 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 AL603766.1-201ENST00000407763 664 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 METTL5-204ENST00000409340 472 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX4Q33E94 RN7SKP106-201ENST00000410832 272 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 USP12PY-201ENST00000427677 1064 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 RPL23AP4-201ENST00000427757 463 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AF228730.2-201ENST00000438784 848 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX4Q33E94 RPL36AP15-201ENST00000444514 266 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX4Q33E94 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC083982.1-201ENST00000485679 344 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AC069499.1-201ENST00000489433 509 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX4Q33E94 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 AL592156.1-201ENST00000508758 304 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 OR7H2P-201ENST00000513483 306 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX4Q33E94 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX4Q33E94 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX4Q33E94 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC006064.5-201ENST00000541782 248 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC3.96□□□□□ -1.78
RFX4Q33E94 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC068020.1-201ENST00000594215 661 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX4Q33E94 AC020658.4-201ENST00000613987 684 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.96□□□□□ -1.78
RFX4Q33E94 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
RFX4Q33E94 LINC02471-203ENST00000641941 4752 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AL592437.2-201ENST00000421655 2434 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 AC027287.1-201ENST00000553115 1453 ntBASIC3.96□□□□□ -1.78
RFX4Q33E94 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.96□□□□□ -1.78
RFX4Q33E94 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
RFX4Q33E94 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
RFX4Q33E94 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
RFX4Q33E94 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
RFX4Q33E94 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
RFX4Q33E94 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
RFX4Q33E94 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.95□□□□□ -1.78
RFX4Q33E94 MIR550A3-201ENST00000390735 95 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AL049697.2-201ENST00000403708 294 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AL356806.1-201ENST00000422524 916 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AC093084.1-201ENST00000424233 687 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AC006455.6-201ENST00000426192 893 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AC011742.1-201ENST00000431448 434 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AL606490.8-201ENST00000441624 319 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.95□□□□□ -1.78
RFX4Q33E94 AL162591.2-201ENST00000449634 317 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 AC010326.1-201ENST00000462726 602 ntBASIC3.95□□□□□ -1.78
RFX4Q33E94 RN7SL205P-201ENST00000490174 284 ntBASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms