Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.6□□□□□ -1.67
LTBQ06643 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 RNU6-513P-201ENST00000516104 104 ntBASIC4.6□□□□□ -1.67
LTBQ06643 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBQ06643 AC024940.3-201ENST00000538551 316 ntBASIC4.6□□□□□ -1.67
LTBQ06643 PYM1-205ENST00000547925 499 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 PARP1P2-201ENST00000556806 195 ntBASIC4.6□□□□□ -1.67
LTBQ06643 TVP23CP2-201ENST00000571473 623 ntBASIC4.6□□□□□ -1.67
LTBQ06643 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.6□□□□□ -1.67
LTBQ06643 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.6□□□□□ -1.67
LTBQ06643 AC018638.7-201ENST00000605836 1114 ntBASIC4.6□□□□□ -1.67
LTBQ06643 AL451049.1-201ENST00000608672 497 ntBASIC4.6□□□□□ -1.67
LTBQ06643 AL138478.1-201ENST00000612252 832 ntBASIC4.6□□□□□ -1.67
LTBQ06643 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 ZNF849P-201ENST00000594711 1566 ntBASIC4.6□□□□□ -1.67
LTBQ06643 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC4.6□□□□□ -1.67
LTBQ06643 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBQ06643 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.6□□□□□ -1.67
LTBQ06643 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
LTBQ06643 FAP-203ENST00000443424 2598 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBQ06643 AC097461.1-201ENST00000568928 2821 ntBASIC4.59□□□□□ -1.67
LTBQ06643 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBQ06643 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
LTBQ06643 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBQ06643 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.59□□□□□ -1.67
LTBQ06643 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBQ06643 RNU6-236P-201ENST00000363886 106 ntBASIC4.59□□□□□ -1.67
LTBQ06643 RNVU1-6-201ENST00000364688 164 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AL078595.1-201ENST00000404458 226 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBQ06643 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.59□□□□□ -1.67
LTBQ06643 MFSD13B-201ENST00000420133 1290 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC023128.2-201ENST00000420880 1223 ntBASIC4.59□□□□□ -1.67
LTBQ06643 USP9YP26-201ENST00000421008 661 ntBASIC4.59□□□□□ -1.67
LTBQ06643 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LTBQ06643 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBQ06643 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.59□□□□□ -1.67
LTBQ06643 AL008629.1-201ENST00000438615 184 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC092647.2-201ENST00000452998 253 ntBASIC4.59□□□□□ -1.67
LTBQ06643 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.59□□□□□ -1.67
LTBQ06643 SEPT7P3-201ENST00000455017 621 ntBASIC4.59□□□□□ -1.67
LTBQ06643 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBQ06643 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBQ06643 RN7SL443P-201ENST00000464331 290 ntBASIC4.59□□□□□ -1.67
LTBQ06643 RN7SL354P-201ENST00000469282 294 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC103987.1-201ENST00000473394 348 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC090114.3-201ENST00000479267 829 ntBASIC4.59□□□□□ -1.67
LTBQ06643 MTND2P14-201ENST00000482139 351 ntBASIC4.59□□□□□ -1.67
LTBQ06643 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBQ06643 RNA5SP303-201ENST00000516192 130 ntBASIC4.59□□□□□ -1.67
LTBQ06643 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBQ06643 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBQ06643 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBQ06643 AC104417.1-201ENST00000523974 751 ntBASIC4.59□□□□□ -1.67
LTBQ06643 MTND2P26-201ENST00000528255 1029 ntBASIC4.59□□□□□ -1.67
LTBQ06643 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LTBQ06643 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBQ06643 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBQ06643 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 EDDM3DP-201ENST00000554692 434 ntBASIC4.59□□□□□ -1.67
LTBQ06643 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.59□□□□□ -1.67
LTBQ06643 AC209154.1-201ENST00000582156 337 ntBASIC4.59□□□□□ -1.67
LTBQ06643 MIR3936-201ENST00000584304 110 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 BNIP3P33-201ENST00000598912 569 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC005261.4-201ENST00000600047 1385 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC095055.1-201ENST00000603472 1113 ntBASIC4.59□□□□□ -1.67
LTBQ06643 TUSC7.1-201ENST00000610969 165 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AC013562.2-201ENST00000611632 603 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AL161616.1-201ENST00000611867 286 ntBASIC4.59□□□□□ -1.67
LTBQ06643 EIF3FP1-201ENST00000613970 806 ntBASIC4.59□□□□□ -1.67
LTBQ06643 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
LTBQ06643 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.59□□□□□ -1.67
LTBQ06643 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
LTBQ06643 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 AC067852.7-201ENST00000623270 535 ntBASIC4.59□□□□□ -1.67
LTBQ06643 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
LTBQ06643 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
LTBQ06643 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.68
LTBQ06643 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.59□□□□□ -1.68
LTBQ06643 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms