Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 AC068870.3-201ENST00000625077 2536 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC2.42□□□□□ -2.02
HSPG2P98160 VPS35P1-201ENST00000563400 1518 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 GTF3AP5-201ENST00000442645 697 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 Z75741.1-201ENST00000446793 314 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 QTRT1P1-201ENST00000604344 1078 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC2.42□□□□□ -2.02
HSPG2P98160 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC2.42□□□□□ -2.02
HSPG2P98160 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC2.42□□□□□ -2.02
HSPG2P98160 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 HSP90AA4P-202ENST00000506915 2228 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 MAPK10-253ENST00000641010 4072 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 AC009506.2-201ENST00000420635 840 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC2.42□□□□□ -2.02
HSPG2P98160 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.42□□□□□ -2.02
HSPG2P98160 EIF1P3-201ENST00000423841 334 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 RBMY2UP-201ENST00000453474 324 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AP001992.1-205ENST00000462248 379 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC2.42□□□□□ -2.02
HSPG2P98160 RPL27AP5-201ENST00000469428 449 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 PPP1R11P1-201ENST00000486095 376 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.42□□□□□ -2.02
HSPG2P98160 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 AC027216.1-201ENST00000577726 685 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AL451007.1-201ENST00000595491 289 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AC006023.1-201ENST00000603944 259 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 AL117339.4-201ENST00000608335 7063 ntBASIC2.42□□□□□ -2.02
HSPG2P98160 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HSPG2P98160 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
HSPG2P98160 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 AL591135.1-201ENST00000401578 5914 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 TSC1-208ENST00000545250 8310 ntTSL 5 BASIC2.41□□□□□ -2.02
HSPG2P98160 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HSPG2P98160 AC092828.1-201ENST00000501211 5391 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HSPG2P98160 SNORD66.1-201ENST00000391230 76 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC2.41□□□□□ -2.02
HSPG2P98160 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC2.41□□□□□ -2.02
HSPG2P98160 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC2.41□□□□□ -2.02
HSPG2P98160 AC006011.1-201ENST00000442758 349 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 AC097462.2-201ENST00000504623 481 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.41□□□□□ -2.02
HSPG2P98160 DEFB109D-201ENST00000529497 240 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 AC090246.1-201ENST00000616499 426 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC2.41□□□□□ -2.02
HSPG2P98160 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 MIR449A-201ENST00000362113 91 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 AC087650.1-201ENST00000431445 468 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC2.41□□□□□ -2.02
HSPG2P98160 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC2.41□□□□□ -2.02
HSPG2P98160 DEFB109A-201ENST00000482450 265 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC2.41□□□□□ -2.02
HSPG2P98160 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC2.41□□□□□ -2.02
HSPG2P98160 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.41□□□□□ -2.02
HSPG2P98160 HMGB2P1-201ENST00000591146 634 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 AC068722.2-201ENST00000618734 544 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HSPG2P98160 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HSPG2P98160 BTBD10P1-201ENST00000549824 1352 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 RNA5SP80-201ENST00000410475 111 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC2.41□□□□□ -2.02
HSPG2P98160 AC083863.1-201ENST00000438811 231 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 PHBP14-201ENST00000512887 367 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC2.41□□□□□ -2.02
HSPG2P98160 AC027176.2-201ENST00000559166 746 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.41□□□□□ -2.02
HSPG2P98160 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 AP004289.2-201ENST00000444413 1457 ntBASIC2.41□□□□□ -2.02
HSPG2P98160 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
HSPG2P98160 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC2.4□□□□□ -2.02
HSPG2P98160 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC2.4□□□□□ -2.02
HSPG2P98160 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC2.4□□□□□ -2.02
HSPG2P98160 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.4□□□□□ -2.02
HSPG2P98160 SNORA60-201ENST00000362396 134 ntBASIC2.4□□□□□ -2.02
HSPG2P98160 RNA5SP51-201ENST00000364750 119 ntBASIC2.4□□□□□ -2.02
HSPG2P98160 GLS-204ENST00000409428 816 ntTSL 2 BASIC2.4□□□□□ -2.02
HSPG2P98160 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.4□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms