Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC079841.1-201ENST00000481228 950 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC097173.1-201ENST00000505862 819 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CL1P78423 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CL1P78423 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CL1P78423 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.09□□□□□ -1.75
CX3CL1P78423 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC4.09□□□□□ -1.75
CX3CL1P78423 OR4C2P-201ENST00000530855 1064 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC023813.2-201ENST00000564321 469 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.09□□□□□ -1.75
CX3CL1P78423 MIR1269B-201ENST00000580405 75 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 NF1P5-201ENST00000588287 448 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.09□□□□□ -1.75
CX3CL1P78423 SUMO2P15-201ENST00000604285 278 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 AL445423.1-201ENST00000609941 536 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC140725.3-201ENST00000616193 880 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 MIR6826-201ENST00000617808 98 ntBASIC4.09□□□□□ -1.75
CX3CL1P78423 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.09□□□□□ -1.75
CX3CL1P78423 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC4.09□□□□□ -1.75
CX3CL1P78423 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC4.09□□□□□ -1.75
CX3CL1P78423 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CX3CL1P78423 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.09□□□□□ -1.75
CX3CL1P78423 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.09□□□□□ -1.76
CX3CL1P78423 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.09□□□□□ -1.76
CX3CL1P78423 AC126323.6-202ENST00000568092 3511 ntBASIC4.09□□□□□ -1.76
CX3CL1P78423 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
CX3CL1P78423 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.09□□□□□ -1.76
CX3CL1P78423 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CX3CL1P78423 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CX3CL1P78423 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CX3CL1P78423 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CX3CL1P78423 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CX3CL1P78423 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 RNU6-636P-201ENST00000384598 107 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.08□□□□□ -1.76
CX3CL1P78423 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 RN7SKP229-201ENST00000410465 302 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 RN7SKP125-201ENST00000410481 302 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 PRELID3BP11-201ENST00000414230 479 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 HIGD1AP15-201ENST00000416198 280 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 OR2X1P-201ENST00000421144 687 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 RPL12P34-201ENST00000424532 479 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC063976.2-201ENST00000425667 3556 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.08□□□□□ -1.76
CX3CL1P78423 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 MTCO1P3-201ENST00000429327 192 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CL1P78423 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 CR769776.1-201ENST00000441254 787 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 TPTE2P3-201ENST00000441562 1189 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 RAB11AP1-201ENST00000442978 646 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 OTX2P1-201ENST00000450956 354 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AL389915.2-201ENST00000454576 441 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC091180.1-201ENST00000462104 372 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 OR52A4P-201ENST00000472867 958 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 RPL30P11-201ENST00000495304 339 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 MTND4LP2-201ENST00000502312 285 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 HIGD1AP14-201ENST00000507617 282 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 TCP11X3P-202ENST00000514289 1254 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 HIGD1AP6-201ENST00000521833 279 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CL1P78423 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.08□□□□□ -1.76
CX3CL1P78423 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC063949.1-201ENST00000552900 865 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 OR4U1P-201ENST00000554958 912 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CX3CL1P78423 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CL1P78423 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.08□□□□□ -1.76
CX3CL1P78423 AC087683.2-201ENST00000611384 326 ntBASIC4.08□□□□□ -1.76
CX3CL1P78423 AC009163.6-201ENST00000612367 342 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms