Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH4P55283 PGBD4P4-201ENST00000509673 613 ntBASIC4.42□□□□□ -1.7
CDH4P55283 AC008958.1-201ENST00000511047 682 ntBASIC4.42□□□□□ -1.7
CDH4P55283 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH4P55283 RNA5SP73-201ENST00000516744 108 ntBASIC4.42□□□□□ -1.7
CDH4P55283 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.42□□□□□ -1.7
CDH4P55283 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.42□□□□□ -1.7
CDH4P55283 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH4P55283 AC009268.1-201ENST00000561352 1203 ntBASIC4.42□□□□□ -1.7
CDH4P55283 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC4.42□□□□□ -1.7
CDH4P55283 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC4.42□□□□□ -1.7
CDH4P55283 AC005021.1-201ENST00000608730 355 ntBASIC4.42□□□□□ -1.7
CDH4P55283 FAM27D1-201ENST00000612308 341 ntBASIC4.42□□□□□ -1.7
CDH4P55283 AC116447.1-201ENST00000613153 453 ntBASIC4.42□□□□□ -1.7
CDH4P55283 AL138721.1-201ENST00000616756 179 ntBASIC4.42□□□□□ -1.7
CDH4P55283 RPL23AP61-201ENST00000623642 466 ntBASIC4.42□□□□□ -1.7
CDH4P55283 AC079298.2-201ENST00000623885 459 ntBASIC4.42□□□□□ -1.7
CDH4P55283 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDH4P55283 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDH4P55283 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
CDH4P55283 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.42□□□□□ -1.7
CDH4P55283 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CDH4P55283 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDH4P55283 AC009951.1-201ENST00000623674 2614 ntBASIC4.42□□□□□ -1.7
CDH4P55283 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH4P55283 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH4P55283 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDH4P55283 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH4P55283 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH4P55283 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH4P55283 ASNSP1-201ENST00000518311 1939 ntBASIC4.41□□□□□ -1.7
CDH4P55283 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDH4P55283 RNU1-14P-201ENST00000362759 152 ntBASIC4.41□□□□□ -1.7
CDH4P55283 AC068538.1-201ENST00000376856 336 ntBASIC4.41□□□□□ -1.7
CDH4P55283 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH4P55283 RNU6-532P-201ENST00000384318 107 ntBASIC4.41□□□□□ -1.7
CDH4P55283 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH4P55283 RN7SKP235-201ENST00000410662 305 ntBASIC4.41□□□□□ -1.7
CDH4P55283 BTF3P9-201ENST00000418784 283 ntBASIC4.41□□□□□ -1.7
CDH4P55283 MFSD13B-201ENST00000420133 1290 ntBASIC4.41□□□□□ -1.7
CDH4P55283 GTF2IP2-201ENST00000424290 697 ntBASIC4.41□□□□□ -1.7
CDH4P55283 AL353898.1-201ENST00000444055 238 ntBASIC4.41□□□□□ -1.7
CDH4P55283 GEMIN8P3-201ENST00000445417 720 ntBASIC4.41□□□□□ -1.7
CDH4P55283 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH4P55283 RN7SL385P-201ENST00000468873 276 ntBASIC4.41□□□□□ -1.7
CDH4P55283 AC010618.1-201ENST00000469924 477 ntBASIC4.41□□□□□ -1.7
CDH4P55283 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH4P55283 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.41□□□□□ -1.7
CDH4P55283 CDH12P2-201ENST00000504393 298 ntBASIC4.41□□□□□ -1.7
CDH4P55283 NDUFB4P12-201ENST00000513465 390 ntBASIC4.41□□□□□ -1.7
CDH4P55283 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH4P55283 RNA5SP49-201ENST00000516450 115 ntBASIC4.41□□□□□ -1.7
CDH4P55283 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH4P55283 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH4P55283 AC138701.1-201ENST00000524329 714 ntBASIC4.41□□□□□ -1.7
CDH4P55283 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH4P55283 OR7E10P-201ENST00000526420 991 ntBASIC4.41□□□□□ -1.7
CDH4P55283 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.41□□□□□ -1.7
CDH4P55283 AL109766.1-201ENST00000555080 552 ntBASIC4.41□□□□□ -1.7
CDH4P55283 MIR3939-201ENST00000582614 106 ntBASIC4.41□□□□□ -1.7
CDH4P55283 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.41□□□□□ -1.7
CDH4P55283 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH4P55283 MIR6716-201ENST00000613413 80 ntBASIC4.41□□□□□ -1.7
CDH4P55283 AL445567.2-201ENST00000618935 498 ntBASIC4.41□□□□□ -1.7
CDH4P55283 AC019278.1-201ENST00000623516 479 ntBASIC4.41□□□□□ -1.7
CDH4P55283 DDX18P4-201ENST00000511690 1966 ntBASIC4.41□□□□□ -1.7
CDH4P55283 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH4P55283 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDH4P55283 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDH4P55283 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.41□□□□□ -1.7
CDH4P55283 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CDH4P55283 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.4□□□□□ -1.7
CDH4P55283 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.4□□□□□ -1.7
CDH4P55283 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CDH4P55283 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.7
CDH4P55283 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CDH4P55283 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
CDH4P55283 AC090971.4-201ENST00000560291 1800 ntBASIC4.4□□□□□ -1.7
CDH4P55283 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CDH4P55283 RNA5SP28-201ENST00000363841 119 ntBASIC4.4□□□□□ -1.71
CDH4P55283 RNU6-819P-201ENST00000364116 107 ntBASIC4.4□□□□□ -1.71
CDH4P55283 SNORD66.1-201ENST00000391230 76 ntBASIC4.4□□□□□ -1.71
CDH4P55283 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH4P55283 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH4P55283 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH4P55283 RNA5SP36-201ENST00000410197 133 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH4P55283 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.4□□□□□ -1.71
CDH4P55283 RBMY1KP-201ENST00000423480 476 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC234779.1-201ENST00000425910 285 ntBASIC4.4□□□□□ -1.71
CDH4P55283 NIPA2P1-201ENST00000426223 976 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AL158073.1-201ENST00000426848 1104 ntBASIC4.4□□□□□ -1.71
CDH4P55283 RPL12P46-201ENST00000436610 195 ntBASIC4.4□□□□□ -1.71
CDH4P55283 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH4P55283 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH4P55283 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.4□□□□□ -1.71
CDH4P55283 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC4.4□□□□□ -1.71
CDH4P55283 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.4□□□□□ -1.71
CDH4P55283 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CDH4P55283 AC133473.1-201ENST00000455173 299 ntBASIC4.4□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms