Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CR1P49238 AC069061.3-201ENST00000582254 823 ntBASIC3.86□□□□□ -1.79
CX3CR1P49238 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.86□□□□□ -1.79
CX3CR1P49238 VN1R84P-201ENST00000593697 235 ntBASIC3.86□□□□□ -1.79
CX3CR1P49238 AP003117.1-201ENST00000602771 554 ntBASIC3.86□□□□□ -1.79
CX3CR1P49238 AL355816.1-201ENST00000607951 118 ntBASIC3.86□□□□□ -1.79
CX3CR1P49238 AL021707.7-201ENST00000607991 416 ntBASIC3.86□□□□□ -1.79
CX3CR1P49238 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.86□□□□□ -1.79
CX3CR1P49238 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
CX3CR1P49238 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
CX3CR1P49238 AL118496.1-201ENST00000440201 1812 ntBASIC3.86□□□□□ -1.79
CX3CR1P49238 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.86□□□□□ -1.79
CX3CR1P49238 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.85□□□□□ -1.79
CX3CR1P49238 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
CX3CR1P49238 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
CX3CR1P49238 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC3.85□□□□□ -1.79
CX3CR1P49238 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CR1P49238 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
CX3CR1P49238 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 SNORD113.2-201ENST00000364166 89 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CR1P49238 RNU6-317P-201ENST00000384031 107 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 MIR1911-201ENST00000410783 80 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 AC105402.1-201ENST00000413336 545 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 AL512504.1-201ENST00000415494 778 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 UQCRBP1-201ENST00000421129 336 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 GAPDHP49-201ENST00000421421 961 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.85□□□□□ -1.79
CX3CR1P49238 RPEP2-201ENST00000432149 701 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CR1P49238 HLA-N-201ENST00000437516 135 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 AC104306.1-201ENST00000449702 371 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 NDUFS5P3-201ENST00000450668 321 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.85□□□□□ -1.79
CX3CR1P49238 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CR1P49238 RN7SL354P-201ENST00000469282 294 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CR1P49238 HMGB1P3-201ENST00000502802 616 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CR1P49238 PARP4P3-201ENST00000510265 317 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CR1P49238 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CR1P49238 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 OR5D15P-201ENST00000531671 942 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CR1P49238 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CR1P49238 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CR1P49238 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC3.85□□□□□ -1.79
CX3CR1P49238 RPL23AP97-201ENST00000568955 471 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CR1P49238 MIR4727-201ENST00000622232 55 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 LINC00216-201ENST00000623548 1126 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 AL049536.1-201ENST00000625043 744 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 MIR6715B-201ENST00000637172 77 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CR1P49238 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.85□□□□□ -1.79
CX3CR1P49238 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.85□□□□□ -1.79
CX3CR1P49238 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CR1P49238 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 AC068254.2-201ENST00000623938 3577 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC3.85□□□□□ -1.79
CX3CR1P49238 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 AC010300.1-201ENST00000600671 5134 ntBASIC3.85□□□□□ -1.79
CX3CR1P49238 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
CX3CR1P49238 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
CX3CR1P49238 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
CX3CR1P49238 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
CX3CR1P49238 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CX3CR1P49238 RNU1-15P-201ENST00000353977 144 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.84□□□□□ -1.79
CX3CR1P49238 MIR513A2-201ENST00000385249 127 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AL035419.1-201ENST00000397037 564 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
CX3CR1P49238 HSPD1P16-201ENST00000402302 394 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
CX3CR1P49238 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AL359265.2-201ENST00000434367 631 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 MRPS33P4-201ENST00000434892 317 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AL451050.1-201ENST00000450126 415 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 AL121877.1-201ENST00000453704 622 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 AC023050.1-201ENST00000498198 304 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CR1P49238 HNRNPKP5-201ENST00000515300 253 ntBASIC3.84□□□□□ -1.79
CX3CR1P49238 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.84□□□□□ -1.79
CX3CR1P49238 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.84□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms