Protein–RNA interactions for Protein: P48443

RXRG, Retinoic acid receptor RXR-gamma, humanhuman

Predictions only

Length 463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRGP48443 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.05□□□□□ -1.6
RXRGP48443 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC5.05□□□□□ -1.6
RXRGP48443 BNIP3P1-201ENST00000547295 580 ntBASIC5.05□□□□□ -1.6
RXRGP48443 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.05□□□□□ -1.6
RXRGP48443 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC5.05□□□□□ -1.6
RXRGP48443 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.05□□□□□ -1.6
RXRGP48443 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC5.05□□□□□ -1.6
RXRGP48443 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.05□□□□□ -1.6
RXRGP48443 MEMO1P5-201ENST00000604810 406 ntBASIC5.05□□□□□ -1.6
RXRGP48443 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.05□□□□□ -1.6
RXRGP48443 VN1R74P-201ENST00000613259 503 ntBASIC5.05□□□□□ -1.6
RXRGP48443 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
RXRGP48443 AC100778.3-201ENST00000580060 1750 ntBASIC5.05□□□□□ -1.6
RXRGP48443 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RXRGP48443 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RXRGP48443 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
RXRGP48443 AC090229.1-201ENST00000590983 1609 ntBASIC5.05□□□□□ -1.6
RXRGP48443 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 SDAD1P1-202ENST00000524156 2051 ntBASIC5.04□□□□□ -1.6
RXRGP48443 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.04□□□□□ -1.6
RXRGP48443 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 IRF5P1-201ENST00000504852 2164 ntBASIC5.04□□□□□ -1.6
RXRGP48443 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
RXRGP48443 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RXRGP48443 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
RXRGP48443 RNU5B-4P-201ENST00000363508 111 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AC013442.1-201ENST00000397347 228 ntBASIC5.04□□□□□ -1.6
RXRGP48443 RPL7P27-201ENST00000403775 720 ntBASIC5.04□□□□□ -1.6
RXRGP48443 NUP35P2-201ENST00000416748 943 ntBASIC5.04□□□□□ -1.6
RXRGP48443 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.04□□□□□ -1.6
RXRGP48443 PTP4A1P7-201ENST00000423476 514 ntBASIC5.04□□□□□ -1.6
RXRGP48443 RPS26P30-201ENST00000443431 335 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRGP48443 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.04□□□□□ -1.6
RXRGP48443 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRGP48443 ATP5A1P7-201ENST00000453978 1279 ntBASIC5.04□□□□□ -1.6
RXRGP48443 RPS6P2-201ENST00000454208 705 ntBASIC5.04□□□□□ -1.6
RXRGP48443 RPL21P18-201ENST00000469899 480 ntBASIC5.04□□□□□ -1.6
RXRGP48443 RN7SL738P-201ENST00000470264 297 ntBASIC5.04□□□□□ -1.6
RXRGP48443 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 BTF3P13-201ENST00000513224 490 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRGP48443 RNU6-488P-201ENST00000515918 99 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRGP48443 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRGP48443 AC104115.2-201ENST00000523026 687 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AP003102.1-201ENST00000525638 661 ntBASIC5.04□□□□□ -1.6
RXRGP48443 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.04□□□□□ -1.6
RXRGP48443 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC5.04□□□□□ -1.6
RXRGP48443 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRGP48443 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.04□□□□□ -1.6
RXRGP48443 BPTFP1-201ENST00000579209 492 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AP005119.2-201ENST00000579735 1105 ntBASIC5.04□□□□□ -1.6
RXRGP48443 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.04□□□□□ -1.6
RXRGP48443 AC017100.2-201ENST00000584628 355 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AC008507.2-201ENST00000588402 1176 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AC067852.4-201ENST00000590314 478 ntBASIC5.04□□□□□ -1.6
RXRGP48443 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC5.04□□□□□ -1.6
RXRGP48443 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.04□□□□□ -1.6
RXRGP48443 AC234771.5-201ENST00000600161 514 ntBASIC5.04□□□□□ -1.6
RXRGP48443 OR7A19P-201ENST00000608051 733 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AC124016.2-201ENST00000610058 665 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AC022106.2-201ENST00000620114 757 ntBASIC5.04□□□□□ -1.6
RXRGP48443 MIR6839-201ENST00000620425 113 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AC015871.5-202ENST00000623252 701 ntBASIC5.04□□□□□ -1.6
RXRGP48443 AP000648.2-201ENST00000624182 404 ntBASIC5.04□□□□□ -1.6
RXRGP48443 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.04□□□□□ -1.6
RXRGP48443 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
RXRGP48443 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.04□□□□□ -1.6
RXRGP48443 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.03□□□□□ -1.6
RXRGP48443 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RXRGP48443 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
RXRGP48443 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RXRGP48443 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.03□□□□□ -1.6
RXRGP48443 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRGP48443 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
RXRGP48443 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRGP48443 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRGP48443 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RXRGP48443 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
RXRGP48443 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.03□□□□□ -1.6
RXRGP48443 RNU5B-1-201ENST00000363286 116 ntBASIC5.03□□□□□ -1.6
RXRGP48443 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC5.03□□□□□ -1.6
RXRGP48443 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.03□□□□□ -1.6
RXRGP48443 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.03□□□□□ -1.6
RXRGP48443 RPS7P2-201ENST00000435134 607 ntBASIC5.03□□□□□ -1.6
RXRGP48443 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.03□□□□□ -1.6
RXRGP48443 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.03□□□□□ -1.6
RXRGP48443 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.03□□□□□ -1.6
RXRGP48443 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.03□□□□□ -1.6
RXRGP48443 AL050341.1-201ENST00000447743 313 ntBASIC5.03□□□□□ -1.6
RXRGP48443 TPT1P13-201ENST00000449760 499 ntBASIC5.03□□□□□ -1.6
RXRGP48443 AC009220.1-201ENST00000451614 275 ntBASIC5.03□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms