Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
PTPN9P43378 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 AC107068.1-201ENST00000563286 4218 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTPN9P43378 CASC19-204ENST00000641001 2055 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AL445487.1-201ENST00000415694 1580 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTPN9P43378 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTPN9P43378 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL590762.2-201ENST00000395798 571 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN9P43378 MTCO1P56-201ENST00000401674 224 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 OR51B3P-201ENST00000412287 913 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 RPS7P9-201ENST00000414704 586 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 LINC01881-201ENST00000416103 412 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC092447.3-201ENST00000426027 686 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC092634.2-201ENST00000428146 1010 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL137076.1-201ENST00000441046 551 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL031584.1-201ENST00000447169 754 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL935212.3-201ENST00000450729 284 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 OTX2P1-201ENST00000450956 354 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN9P43378 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 CDC42P1-201ENST00000456658 548 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN9P43378 AC079203.1-201ENST00000487972 404 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC023050.1-201ENST00000498198 304 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 AC114322.1-201ENST00000506771 926 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC113420.1-201ENST00000507903 571 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 PRELID3BP5-201ENST00000508612 460 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC091868.1-201ENST00000508746 304 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 PRELID3BP4-201ENST00000515476 571 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 RNU6-311P-201ENST00000516224 102 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC4.97□□□□□ -1.61
PTPN9P43378 PCNPP1-201ENST00000552501 511 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 OR1F2P-201ENST00000570470 933 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN9P43378 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL450336.1-201ENST00000605180 586 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AL365400.2-201ENST00000605604 902 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC013468.1-201ENST00000608680 598 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC015804.1-201ENST00000622935 435 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
PTPN9P43378 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL731566.1-201ENST00000620490 1937 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN9P43378 AL137100.1-201ENST00000556703 1620 ntBASIC4.97□□□□□ -1.61
PTPN9P43378 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC4.97□□□□□ -1.61
PTPN9P43378 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
PTPN9P43378 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
PTPN9P43378 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.96□□□□□ -1.61
PTPN9P43378 AL442639.1-201ENST00000625030 1899 ntBASIC4.96□□□□□ -1.61
PTPN9P43378 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.96□□□□□ -1.61
PTPN9P43378 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN9P43378 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN9P43378 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN9P43378 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PTPN9P43378 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.96□□□□□ -1.62
PTPN9P43378 RNU4-51P-201ENST00000364206 140 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 RNU6-98P-201ENST00000384173 107 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AL592291.1-201ENST00000403830 352 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 RN7SKP100-201ENST00000411258 284 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC092745.2-202ENST00000411880 369 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC4.96□□□□□ -1.62
PTPN9P43378 AC092648.1-201ENST00000425870 423 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.96□□□□□ -1.62
PTPN9P43378 OR2B7P-201ENST00000429302 934 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC4.96□□□□□ -1.62
PTPN9P43378 MTCO3P21-201ENST00000430791 643 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 NRBF2P3-201ENST00000432731 865 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.96□□□□□ -1.62
PTPN9P43378 ELOCP13-201ENST00000443934 329 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC104651.2-201ENST00000447549 528 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 OR1H1P-201ENST00000448731 937 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AC244505.3-201ENST00000454598 187 ntBASIC4.96□□□□□ -1.62
PTPN9P43378 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms