Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC025175.1-201ENST00000606482 759 ntBASIC4.62□□□□□ -1.67
CDH3P22223 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH3P22223 MIR6748-201ENST00000610433 71 ntBASIC4.62□□□□□ -1.67
CDH3P22223 AC009318.3-201ENST00000616916 503 ntBASIC4.62□□□□□ -1.67
CDH3P22223 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH3P22223 AC068880.4-201ENST00000623082 495 ntBASIC4.62□□□□□ -1.67
CDH3P22223 AC067852.7-201ENST00000623270 535 ntBASIC4.62□□□□□ -1.67
CDH3P22223 AC010872.1-201ENST00000624225 675 ntBASIC4.62□□□□□ -1.67
CDH3P22223 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
CDH3P22223 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.62□□□□□ -1.67
CDH3P22223 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH3P22223 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH3P22223 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.62□□□□□ -1.67
CDH3P22223 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH3P22223 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH3P22223 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CDH3P22223 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CDH3P22223 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
CDH3P22223 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH3P22223 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CDH3P22223 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH3P22223 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH3P22223 AL442639.1-201ENST00000625030 1899 ntBASIC4.61□□□□□ -1.67
CDH3P22223 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 AL590240.1-201ENST00000334118 313 ntBASIC4.61□□□□□ -1.67
CDH3P22223 MIR16-2-201ENST00000362117 81 ntBASIC4.61□□□□□ -1.67
CDH3P22223 MIR448-201ENST00000362131 111 ntBASIC4.61□□□□□ -1.67
CDH3P22223 RNVU1-6-201ENST00000364688 164 ntBASIC4.61□□□□□ -1.67
CDH3P22223 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CDH3P22223 MIR192-201ENST00000384915 110 ntBASIC4.61□□□□□ -1.67
CDH3P22223 RPS16P5-201ENST00000406501 404 ntBASIC4.61□□□□□ -1.67
CDH3P22223 XKRYP4-201ENST00000414395 483 ntBASIC4.61□□□□□ -1.67
CDH3P22223 RPS12P5-201ENST00000423449 371 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AC073069.1-201ENST00000428657 441 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH3P22223 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH3P22223 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH3P22223 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 AC073264.2-201ENST00000448886 166 ntBASIC4.61□□□□□ -1.67
CDH3P22223 XKRYP5-201ENST00000449659 483 ntBASIC4.61□□□□□ -1.67
CDH3P22223 FGF7P3-201ENST00000454645 303 ntBASIC4.61□□□□□ -1.67
CDH3P22223 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC4.61□□□□□ -1.67
CDH3P22223 AC091868.1-201ENST00000508746 304 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AC121161.1-201ENST00000510606 652 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.61□□□□□ -1.67
CDH3P22223 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH3P22223 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH3P22223 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH3P22223 RN7SL802P-201ENST00000577858 299 ntBASIC4.61□□□□□ -1.67
CDH3P22223 MIR5699-201ENST00000578903 90 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH3P22223 BNIP3P27-201ENST00000599991 412 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AC133794.1-201ENST00000602731 914 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH3P22223 AC015813.4-201ENST00000610469 179 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH3P22223 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH3P22223 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.61□□□□□ -1.67
CDH3P22223 AL136164.3-201ENST00000624429 3978 ntBASIC4.61□□□□□ -1.67
CDH3P22223 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.61□□□□□ -1.67
CDH3P22223 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.61□□□□□ -1.67
CDH3P22223 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CDH3P22223 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CDH3P22223 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CDH3P22223 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH3P22223 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 RNU6-1279P-201ENST00000383917 103 ntBASIC4.6□□□□□ -1.67
CDH3P22223 RNU6-1005P-201ENST00000384519 107 ntBASIC4.6□□□□□ -1.67
CDH3P22223 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CDH3P22223 RNU1-82P-201ENST00000390851 165 ntBASIC4.6□□□□□ -1.67
CDH3P22223 RNU6-244P-201ENST00000391028 104 ntBASIC4.6□□□□□ -1.67
CDH3P22223 AL592291.1-201ENST00000403830 352 ntBASIC4.6□□□□□ -1.67
CDH3P22223 RNU2-17P-201ENST00000410290 190 ntBASIC4.6□□□□□ -1.67
CDH3P22223 AL450992.3-201ENST00000413192 568 ntBASIC4.6□□□□□ -1.67
CDH3P22223 RPL26P29-201ENST00000415623 438 ntBASIC4.6□□□□□ -1.67
CDH3P22223 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 MRPL50P1-201ENST00000431951 384 ntBASIC4.6□□□□□ -1.67
CDH3P22223 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH3P22223 RPS26P2-201ENST00000440331 348 ntBASIC4.6□□□□□ -1.67
CDH3P22223 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.6□□□□□ -1.67
CDH3P22223 GXYLT1P1-201ENST00000446657 490 ntBASIC4.6□□□□□ -1.67
CDH3P22223 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC4.6□□□□□ -1.67
CDH3P22223 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CDH3P22223 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.6□□□□□ -1.67
CDH3P22223 RN7SL738P-201ENST00000470264 297 ntBASIC4.6□□□□□ -1.67
CDH3P22223 RPL23AP72-201ENST00000492447 435 ntBASIC4.6□□□□□ -1.67
CDH3P22223 PRELID3BP7-201ENST00000503606 469 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms