Protein–RNA interactions for Protein: P17812

CTPS1, CTP synthase 1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1P17812 AC079203.1-201ENST00000487972 404 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC111193.1-201ENST00000504097 155 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC4.86□□□□□ -1.63
CTPS1P17812 AP001880.2-201ENST00000538233 448 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.86□□□□□ -1.63
CTPS1P17812 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.86□□□□□ -1.63
CTPS1P17812 AC133555.2-201ENST00000550213 292 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 PCNPP1-201ENST00000552501 511 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.86□□□□□ -1.63
CTPS1P17812 BGLT3-201ENST00000564523 994 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC093249.4-201ENST00000564755 259 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC095057.3-201ENST00000567102 1157 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 MIR4480-201ENST00000582492 71 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.86□□□□□ -1.63
CTPS1P17812 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC4.86□□□□□ -1.63
CTPS1P17812 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTPS1P17812 AC005084.1-201ENST00000605160 304 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTPS1P17812 AC013468.1-201ENST00000608680 598 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC004948.1-201ENST00000609858 672 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 FAM27B-201ENST00000610601 213 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC100827.5-201ENST00000615883 426 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 STMN1P1-201ENST00000617809 440 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC006386.1-201ENST00000619436 415 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC012414.7-202ENST00000622705 1090 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AP000676.4-201ENST00000624659 623 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.86□□□□□ -1.63
CTPS1P17812 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTPS1P17812 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTPS1P17812 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.86□□□□□ -1.63
CTPS1P17812 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CTPS1P17812 AC099786.3-201ENST00000565735 1410 ntBASIC4.86□□□□□ -1.63
CTPS1P17812 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTPS1P17812 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.86□□□□□ -1.63
CTPS1P17812 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTPS1P17812 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.86□□□□□ -1.63
CTPS1P17812 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CTPS1P17812 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 STX3-208ENST00000641815 3236 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTPS1P17812 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTPS1P17812 AC021242.1-201ENST00000507315 2035 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.85□□□□□ -1.63
CTPS1P17812 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTPS1P17812 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTPS1P17812 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
CTPS1P17812 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTPS1P17812 ENSAP3-201ENST00000312710 333 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 ANKRD36P1-201ENST00000344424 659 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 RNU6-543P-201ENST00000362576 108 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AF228730.1-201ENST00000397972 663 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.85□□□□□ -1.63
CTPS1P17812 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTPS1P17812 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.85□□□□□ -1.63
CTPS1P17812 AC099336.2-201ENST00000422457 254 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.85□□□□□ -1.63
CTPS1P17812 ELOCP10-201ENST00000440624 327 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AL592437.1-201ENST00000443781 492 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 Z80107.2-201ENST00000445127 392 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC099063.2-201ENST00000446360 662 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 OR1H1P-201ENST00000448731 937 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 AC099560.2-201ENST00000457554 255 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 RNU6-1218P-201ENST00000458990 108 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 IGLV2-34-201ENST00000490007 283 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC134050.1-201ENST00000495088 933 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 RN7SL558P-201ENST00000497468 299 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.85□□□□□ -1.63
CTPS1P17812 AC119751.1-201ENST00000513357 765 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AL671862.1-201ENST00000515851 349 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.85□□□□□ -1.63
CTPS1P17812 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.85□□□□□ -1.63
CTPS1P17812 OR5D15P-201ENST00000531671 942 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.85□□□□□ -1.63
CTPS1P17812 BNIP3P1-201ENST00000547295 580 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC4.85□□□□□ -1.63
CTPS1P17812 MIR3667-201ENST00000581025 74 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.85□□□□□ -1.63
CTPS1P17812 AC022726.1-201ENST00000587475 207 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.85□□□□□ -1.63
CTPS1P17812 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 ELOCP34-201ENST00000604436 327 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AL049539.1-201ENST00000611964 459 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC009464.1-201ENST00000615731 469 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC015914.2-201ENST00000618167 288 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.85□□□□□ -1.63
CTPS1P17812 AC123767.1-202ENST00000620407 817 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AP002967.1-201ENST00000624203 539 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 AL355578.1-201ENST00000607405 1328 ntBASIC4.85□□□□□ -1.63
CTPS1P17812 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.85□□□□□ -1.63
CTPS1P17812 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CTPS1P17812 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CTPS1P17812 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.85□□□□□ -1.63
CTPS1P17812 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CTPS1P17812 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms