Protein–RNA interactions for Protein: P17252

PRKCA, Protein kinase C alpha type, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCAP17252 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.67□□□□□ -1.5
PRKCAP17252 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
PRKCAP17252 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
PRKCAP17252 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
PRKCAP17252 AL354854.1-201ENST00000455940 1363 ntBASIC5.67□□□□□ -1.5
PRKCAP17252 SCAMP1-206ENST00000618166 1358 ntTSL 2 BASIC5.67□□□□□ -1.5
PRKCAP17252 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.66□□□□□ -1.5
PRKCAP17252 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 AL022578.1-201ENST00000439330 1433 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PRKCAP17252 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 MTND5P23-201ENST00000430812 1655 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
PRKCAP17252 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 CDC27P2-201ENST00000425026 1922 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 AP001541.1-201ENST00000623322 1904 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
PRKCAP17252 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.66□□□□□ -1.5
PRKCAP17252 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 RNU6-462P-201ENST00000362659 105 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 Y_RNA.89-201ENST00000363031 102 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 RNU1-49P-201ENST00000363468 159 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 Y_RNA.295-201ENST00000364918 102 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 SNORD116-23-201ENST00000384645 92 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 MIR188-201ENST00000385034 86 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
PRKCAP17252 TMSB4XP8-201ENST00000402089 135 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.66□□□□□ -1.5
PRKCAP17252 TMSB4XP6-201ENST00000415187 135 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 BOLA3P4-201ENST00000418151 400 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 C1DP2-201ENST00000418167 426 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 TMSB4XP1-201ENST00000424567 135 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AC099782.1-201ENST00000425889 474 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 RPL37P21-201ENST00000435890 276 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 AL451074.3-201ENST00000437709 472 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 PPIAP10-201ENST00000438675 458 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 UBE2V1P5-201ENST00000440070 405 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 MTND5P14-201ENST00000441481 1267 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AL645936.1-201ENST00000441979 518 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 AC108463.1-201ENST00000450258 347 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 RPS27AP3-201ENST00000453803 454 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 HMGN1P12-201ENST00000499125 195 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AC106822.1-201ENST00000502647 526 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 OR5AP1P-201ENST00000529730 940 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 AP001858.2-201ENST00000536213 601 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC5.66□□□□□ -1.5
PRKCAP17252 SNORD39.2-201ENST00000579995 76 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 RN7SL230P-201ENST00000580835 303 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.66□□□□□ -1.5
PRKCAP17252 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.66□□□□□ -1.5
PRKCAP17252 AC115286.1-201ENST00000604298 434 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AC010200.2-201ENST00000605098 235 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AC090525.3-201ENST00000605601 189 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 RPSAP75-201ENST00000605848 301 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AL591167.1-201ENST00000607321 456 ntBASIC5.66□□□□□ -1.5
PRKCAP17252 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.66□□□□□ -1.5
PRKCAP17252 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
PRKCAP17252 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
PRKCAP17252 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 141.4 ms