Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB1P09429 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HMGB1P09429 NUDT19P3-201ENST00000404698 555 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB1P09429 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.19□□□□□ -1.42
HMGB1P09429 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB1P09429 RPS7P9-201ENST00000414704 586 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 USP9YP21-201ENST00000420603 432 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB1P09429 C1DP1-201ENST00000426049 402 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
HMGB1P09429 LYPLA1P1-201ENST00000434514 622 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB1P09429 AL356276.2-201ENST00000435919 558 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB1P09429 HMGN2P21-201ENST00000447764 270 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB1P09429 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB1P09429 FAR2P1-206ENST00000449736 709 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB1P09429 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB1P09429 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGB1P09429 RPS4XP20-201ENST00000505751 772 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 RNA5SP362-201ENST00000516048 118 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 LRRC6P1-201ENST00000532188 885 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC6.19□□□□□ -1.42
HMGB1P09429 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB1P09429 YWHAZP1-201ENST00000556286 722 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 MIR5708-201ENST00000579723 85 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC069307.1-201ENST00000602820 447 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC018754.1-201ENST00000607486 925 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC099676.1-201ENST00000608886 657 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC118658.2-201ENST00000618697 459 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AL512506.2-201ENST00000624472 458 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AL049536.1-201ENST00000625043 744 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC004808.1-201ENST00000627671 721 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AC135068.12-201ENST00000637370 931 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 AL049767.1-202ENST00000637826 242 ntBASIC6.19□□□□□ -1.42
HMGB1P09429 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB1P09429 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB1P09429 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB1P09429 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGB1P09429 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGB1P09429 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB1P09429 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGB1P09429 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGB1P09429 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGB1P09429 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB1P09429 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB1P09429 OR9K1P-201ENST00000326513 941 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 U3.3-201ENST00000362986 216 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 RN7SKP160-201ENST00000363804 340 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB1P09429 RNU6-1176P-201ENST00000390955 107 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 RPL21P67-201ENST00000402896 478 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 MTND4P3-201ENST00000417829 541 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 GTF2IP2-201ENST00000424290 697 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 NANOGP4-201ENST00000427230 913 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB1P09429 AL389925.1-201ENST00000432257 728 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 RPS29P10-201ENST00000439197 166 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 AC092393.1-201ENST00000439625 742 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 MTCYBP42-201ENST00000444653 1130 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB1P09429 Z92846.1-201ENST00000456203 268 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGB1P09429 AC010301.1-201ENST00000473936 355 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 RN7SL174P-201ENST00000475578 289 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 SIAH1P1-201ENST00000479411 923 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 RPL7P39-201ENST00000481157 744 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 CAB39P1-201ENST00000502277 460 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 HPRT1P1-201ENST00000509498 657 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB1P09429 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB1P09429 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB1P09429 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGB1P09429 OR4C2P-201ENST00000530855 1064 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB1P09429 AL049779.2-201ENST00000553847 315 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGB1P09429 AC005412.1-201ENST00000580812 1049 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
HMGB1P09429 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB1P09429 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB1P09429 AL158050.2-201ENST00000605336 568 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 AF129408.1-201ENST00000608767 431 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 AC090527.3-201ENST00000619041 548 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 ALG13-230ENST00000623189 458 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGB1P09429 AC004943.3-201ENST00000624116 600 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGB1P09429 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
HMGB1P09429 CASC19-264ENST00000641912 1184 ntBASIC6.18□□□□□ -1.42
HMGB1P09429 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGB1P09429 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
HMGB1P09429 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGB1P09429 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB1P09429 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB1P09429 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB1P09429 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGB1P09429 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms