Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MTCO2P5-201ENST00000422621 426 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
PDGFAP04085 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 AC119618.1-201ENST00000434191 222 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 AC006335.2-201ENST00000437993 330 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 GAPDHP20-201ENST00000444107 1007 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AP1S2P1-201ENST00000457344 379 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFAP04085 RPS4XP18-201ENST00000495480 763 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 SNORA40.12-201ENST00000516329 111 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AC084121.1-201ENST00000533882 835 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.28□□□□□ -1.4
PDGFAP04085 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 PDCD5P1-201ENST00000543528 309 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 NXPE2P1-201ENST00000543705 726 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 AC011611.1-201ENST00000552179 197 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFAP04085 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFAP04085 RN7SL230P-201ENST00000580835 303 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AC010325.2-201ENST00000594114 260 ntTSL 3 BASIC6.28□□□□□ -1.4
PDGFAP04085 AL590032.1-201ENST00000604920 252 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AL035410.2-201ENST00000604963 864 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AC015982.1-201ENST00000608113 465 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 AC019278.1-201ENST00000623516 479 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 SMAD1-202ENST00000394092 1658 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.28□□□□□ -1.4
PDGFAP04085 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.28□□□□□ -1.4
PDGFAP04085 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
PDGFAP04085 KPNA2P2-201ENST00000419546 1489 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 MSL3P1-202ENST00000440028 1468 ntBASIC6.28□□□□□ -1.4
PDGFAP04085 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PDGFAP04085 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
PDGFAP04085 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.27□□□□□ -1.4
PDGFAP04085 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.4
PDGFAP04085 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 ARCN1-201ENST00000264028 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 IARS-206ENST00000447699 4186 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC129502.1-201ENST00000623261 1654 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PDGFAP04085 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PDGFAP04085 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFAP04085 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
PDGFAP04085 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 XPOTP1-201ENST00000443317 2398 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 RNU6-343P-201ENST00000364709 104 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 RNA5SP172-201ENST00000365061 118 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 UBBP1-201ENST00000392399 473 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC078974.1-201ENST00000411597 223 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC115283.1-201ENST00000427353 400 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 BNIP3P2-201ENST00000441221 577 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC016691.1-201ENST00000441321 413 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 HSPE1P28-201ENST00000443139 211 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PDGFAP04085 POU5F1P5-201ENST00000445059 658 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 HMGN1P2-201ENST00000445197 310 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC023274.2-201ENST00000445264 521 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 RPL7P12-201ENST00000446719 750 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AL161722.1-201ENST00000446972 1032 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AL445466.1-201ENST00000448432 357 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 PRDX1P1-201ENST00000449329 596 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 TCEA1P1-201ENST00000449716 880 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC022431.1-201ENST00000450941 438 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 TRBV26-201ENST00000456572 344 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 RN7SL413P-201ENST00000482700 297 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 PPP1R11P1-201ENST00000486095 376 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFAP04085 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFAP04085 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.27□□□□□ -1.41
PDGFAP04085 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.27□□□□□ -1.41
PDGFAP04085 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC6.27□□□□□ -1.41
PDGFAP04085 AC068714.1-201ENST00000559623 800 ntBASIC6.27□□□□□ -1.41
PDGFAP04085 AC026826.3-201ENST00000561747 158 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms