Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AL162151.2-201ENST00000448875 158 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 snoU13.24-201ENST00000458998 104 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.63□□□□□ -1.67
PDGFBP01127 AC091564.1-201ENST00000464563 479 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 NPM1P41-201ENST00000512920 831 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 RNA5SP230-201ENST00000517039 122 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 AF186190.1-201ENST00000517470 480 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 MTND2P7-201ENST00000521337 640 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC4.63□□□□□ -1.67
PDGFBP01127 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.63□□□□□ -1.67
PDGFBP01127 LINC02443-204ENST00000544717 754 ntTSL 5 BASIC4.63□□□□□ -1.67
PDGFBP01127 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.63□□□□□ -1.67
PDGFBP01127 RN7SL703P-201ENST00000578485 302 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 MIR4286-201ENST00000580651 93 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 RN7SL600P-201ENST00000581811 299 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 MIR4660-201ENST00000583549 74 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 RPL7P50-201ENST00000600588 727 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 AC242628.1-201ENST00000606810 391 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 MIR7973-1-201ENST00000614683 76 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.63□□□□□ -1.67
PDGFBP01127 AC104307.1-201ENST00000616142 196 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 AC123768.4-201ENST00000616244 701 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 AC243756.2-201ENST00000618406 463 ntBASIC4.63□□□□□ -1.67
PDGFBP01127 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.63□□□□□ -1.67
PDGFBP01127 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.63□□□□□ -1.67
PDGFBP01127 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.63□□□□□ -1.67
PDGFBP01127 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
PDGFBP01127 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.62□□□□□ -1.67
PDGFBP01127 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFBP01127 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFBP01127 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFBP01127 AC021242.1-201ENST00000507315 2035 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDGFBP01127 OR5P1P-201ENST00000299512 925 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFBP01127 AC007618.1-201ENST00000366455 732 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFBP01127 RNA5SP241-201ENST00000391326 114 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFBP01127 AL161909.1-201ENST00000397390 712 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 PVALB-202ENST00000404171 422 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFBP01127 OR8G2P-201ENST00000412796 908 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFBP01127 AC093578.1-201ENST00000415219 368 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AC069157.1-201ENST00000421749 137 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 MTCO1P52-201ENST00000433928 531 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 MTND2P21-201ENST00000436242 1042 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.62□□□□□ -1.67
PDGFBP01127 IFNWP4-201ENST00000453148 294 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AC090142.1-201ENST00000465776 462 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFBP01127 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.62□□□□□ -1.67
PDGFBP01127 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFBP01127 Y_RNA.719-201ENST00000517156 106 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFBP01127 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDGFBP01127 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.62□□□□□ -1.67
PDGFBP01127 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.62□□□□□ -1.67
PDGFBP01127 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.62□□□□□ -1.67
PDGFBP01127 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFBP01127 AC116553.2-201ENST00000564203 463 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 MIR548Y-201ENST00000582739 110 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AC110743.1-201ENST00000584870 478 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFBP01127 AC008739.3-201ENST00000603262 127 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 AC243654.2-201ENST00000612843 443 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFBP01127 AL162574.2-201ENST00000614618 657 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 OR2L1P-202ENST00000641567 1023 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFBP01127 EIF2AP4-201ENST00000424793 1781 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
PDGFBP01127 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFBP01127 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
PDGFBP01127 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PDGFBP01127 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFBP01127 DDX6P1-205ENST00000441966 1436 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
PDGFBP01127 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.62□□□□□ -1.67
PDGFBP01127 AL592437.2-201ENST00000421655 2434 ntBASIC4.62□□□□□ -1.67
PDGFBP01127 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
PDGFBP01127 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.61□□□□□ -1.67
PDGFBP01127 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.61□□□□□ -1.67
PDGFBP01127 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
PDGFBP01127 RNA5SP513-201ENST00000364648 118 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 MIR200C-201ENST00000384980 68 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 AC114814.2-201ENST00000419195 485 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 COX6CP15-201ENST00000426313 211 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 HMGB3P5-201ENST00000428894 612 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 MTND4LP14-201ENST00000429447 288 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 AL445584.1-201ENST00000431451 330 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 AC007389.2-201ENST00000434630 306 ntBASIC4.61□□□□□ -1.67
PDGFBP01127 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms