Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.8□□□□□ -1.8
SNRNP200O75643 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 SNORD35B-201ENST00000363660 87 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC3.8□□□□□ -1.8
SNRNP200O75643 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.8□□□□□ -1.8
SNRNP200O75643 KCTD10P1-201ENST00000434203 625 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AC104306.1-201ENST00000449702 371 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNRNP200O75643 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
SNRNP200O75643 SCARNA14-201ENST00000516903 136 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.8□□□□□ -1.8
SNRNP200O75643 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AC008011.1-201ENST00000545989 227 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AL390334.1-201ENST00000556395 450 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AL049634.3-201ENST00000604968 457 ntBASIC3.8□□□□□ -1.8
SNRNP200O75643 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC3.8□□□□□ -1.8
SNRNP200O75643 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.8□□□□□ -1.8
SNRNP200O75643 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC3.79□□□□□ -1.8
SNRNP200O75643 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNRNP200O75643 RNA5SP388-201ENST00000362584 119 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
SNRNP200O75643 RNU4-6P-201ENST00000410804 122 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SNRNP200O75643 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.79□□□□□ -1.8
SNRNP200O75643 AL158073.1-201ENST00000426848 1104 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.79□□□□□ -1.8
SNRNP200O75643 MTCYBP21-201ENST00000443300 1113 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 NDUFA5P2-201ENST00000519723 344 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.79□□□□□ -1.8
SNRNP200O75643 AC007599.1-201ENST00000568688 1174 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 SNX6P1-201ENST00000601728 1224 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 OR51C1P-201ENST00000608504 942 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 AP000255.1-201ENST00000610276 676 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 AC138627.1-204ENST00000641894 765 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNRNP200O75643 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC3.79□□□□□ -1.8
SNRNP200O75643 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNRNP200O75643 CASC19-255ENST00000641733 1385 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNRNP200O75643 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.79□□□□□ -1.8
SNRNP200O75643 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNRNP200O75643 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.79□□□□□ -1.8
SNRNP200O75643 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNRNP200O75643 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SNRNP200O75643 MTCO1P46-201ENST00000451639 1491 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 RNU1-108P-201ENST00000362556 161 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 RNA5SP513-201ENST00000364648 118 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.79□□□□□ -1.8
SNRNP200O75643 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.79□□□□□ -1.8
SNRNP200O75643 RNU7-143P-201ENST00000516781 65 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.79□□□□□ -1.8
SNRNP200O75643 DYNLL1P4-201ENST00000549314 266 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC3.79□□□□□ -1.8
SNRNP200O75643 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC3.79□□□□□ -1.8
SNRNP200O75643 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.79□□□□□ -1.8
SNRNP200O75643 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC3.79□□□□□ -1.8
SNRNP200O75643 AC015726.1-201ENST00000602353 681 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 AC099676.1-201ENST00000608886 657 ntBASIC3.79□□□□□ -1.8
SNRNP200O75643 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.79□□□□□ -1.8
SNRNP200O75643 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.79□□□□□ -1.8
SNRNP200O75643 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SNRNP200O75643 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SNRNP200O75643 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SNRNP200O75643 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SNRNP200O75643 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.78□□□□□ -1.8
SNRNP200O75643 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SNRNP200O75643 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
SNRNP200O75643 AC233289.1-201ENST00000403700 508 ntBASIC3.78□□□□□ -1.8
SNRNP200O75643 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNRNP200O75643 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNRNP200O75643 MTCO1P54-201ENST00000430139 712 ntBASIC3.78□□□□□ -1.8
SNRNP200O75643 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.78□□□□□ -1.8
SNRNP200O75643 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC3.78□□□□□ -1.8
SNRNP200O75643 RPS29P7-201ENST00000439662 171 ntBASIC3.78□□□□□ -1.8
SNRNP200O75643 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNRNP200O75643 RPS20P21-201ENST00000466859 343 ntBASIC3.78□□□□□ -1.8
SNRNP200O75643 AC069240.1-201ENST00000548774 375 ntBASIC3.78□□□□□ -1.8
SNRNP200O75643 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
SNRNP200O75643 FAM91A3P-201ENST00000456826 2544 ntBASIC3.78□□□□□ -1.8
SNRNP200O75643 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNRNP200O75643 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SNRNP200O75643 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.78□□□□□ -1.81
SNRNP200O75643 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.81
SNRNP200O75643 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
SNRNP200O75643 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.77□□□□□ -1.81
SNRNP200O75643 NANOGP10-201ENST00000453325 895 ntBASIC3.77□□□□□ -1.81
SNRNP200O75643 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.77□□□□□ -1.81
SNRNP200O75643 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC3.77□□□□□ -1.81
SNRNP200O75643 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms