Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC1.76□□□□□ -2.13
USH2AO75445 HIVEP2-203ENST00000367604 10032 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 PDK1-201ENST00000282077 14193 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
USH2AO75445 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 RNA5SP175-201ENST00000364275 119 ntBASIC1.76□□□□□ -2.13
USH2AO75445 UBA52P6-201ENST00000399822 382 ntBASIC1.76□□□□□ -2.13
USH2AO75445 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC1.76□□□□□ -2.13
USH2AO75445 DCLRE1CP1-201ENST00000454630 470 ntBASIC1.76□□□□□ -2.13
USH2AO75445 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC1.76□□□□□ -2.13
USH2AO75445 AC125494.3-201ENST00000602759 455 ntBASIC1.76□□□□□ -2.13
USH2AO75445 AC243654.2-201ENST00000612843 443 ntBASIC1.76□□□□□ -2.13
USH2AO75445 FP325330.3-201ENST00000623760 9537 ntBASIC1.76□□□□□ -2.13
USH2AO75445 LYST-202ENST00000389794 12985 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC1.76□□□□□ -2.13
USH2AO75445 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
USH2AO75445 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC1.75□□□□□ -2.13
USH2AO75445 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 MIR422A-201ENST00000362286 90 ntBASIC1.75□□□□□ -2.13
USH2AO75445 AL158827.1-201ENST00000416300 391 ntBASIC1.75□□□□□ -2.13
USH2AO75445 RPS26P2-201ENST00000440331 348 ntBASIC1.75□□□□□ -2.13
USH2AO75445 AC024451.1-201ENST00000508013 779 ntBASIC1.75□□□□□ -2.13
USH2AO75445 RNA5SP179-201ENST00000517284 121 ntBASIC1.75□□□□□ -2.13
USH2AO75445 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC1.75□□□□□ -2.13
USH2AO75445 DEFB109D-201ENST00000529497 240 ntBASIC1.75□□□□□ -2.13
USH2AO75445 NACA-211ENST00000548563 827 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 AC079171.1-201ENST00000568788 914 ntBASIC1.75□□□□□ -2.13
USH2AO75445 AC026367.3-201ENST00000619032 590 ntBASIC1.75□□□□□ -2.13
USH2AO75445 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC1.75□□□□□ -2.13
USH2AO75445 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 MBD5-201ENST00000404807 5920 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 RPL23AP69-201ENST00000431134 458 ntBASIC1.75□□□□□ -2.13
USH2AO75445 S100A11P2-201ENST00000467589 312 ntBASIC1.75□□□□□ -2.13
USH2AO75445 HIGD1AP3-201ENST00000515857 278 ntBASIC1.75□□□□□ -2.13
USH2AO75445 BMS1P21-201ENST00000634565 365 ntBASIC1.75□□□□□ -2.13
USH2AO75445 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 AC073136.1-201ENST00000449426 2884 ntBASIC1.75□□□□□ -2.13
USH2AO75445 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 NACA-203ENST00000454682 6629 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC1.75□□□□□ -2.13
USH2AO75445 SUPT16HP1-201ENST00000537175 3133 ntBASIC1.75□□□□□ -2.13
USH2AO75445 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC1.75□□□□□ -2.13
USH2AO75445 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC1.75□□□□□ -2.13
USH2AO75445 MIR7-2-201ENST00000384970 110 ntBASIC1.75□□□□□ -2.13
USH2AO75445 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC1.75□□□□□ -2.13
USH2AO75445 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC1.75□□□□□ -2.13
USH2AO75445 AC103783.1-201ENST00000520506 373 ntBASIC1.75□□□□□ -2.13
USH2AO75445 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC1.75□□□□□ -2.13
USH2AO75445 NPM1P47-201ENST00000560843 856 ntBASIC1.75□□□□□ -2.13
USH2AO75445 AMOT-203ENST00000371959 7319 ntAPPRIS ALT2 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 AC126323.6-202ENST00000568092 3511 ntBASIC1.75□□□□□ -2.13
USH2AO75445 NAV2-216ENST00000540292 11003 ntAPPRIS ALT1 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
USH2AO75445 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC1.75□□□□□ -2.13
USH2AO75445 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC1.75□□□□□ -2.13
USH2AO75445 TOPORSLP1-201ENST00000467693 2102 ntBASIC1.75□□□□□ -2.13
USH2AO75445 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 ZNF402P-201ENST00000404435 3100 ntBASIC1.75□□□□□ -2.13
USH2AO75445 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC1.75□□□□□ -2.13
USH2AO75445 APOA2-205ENST00000468465 421 ntTSL 2 BASIC1.75□□□□□ -2.13
USH2AO75445 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC1.75□□□□□ -2.13
USH2AO75445 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC1.75□□□□□ -2.13
USH2AO75445 AC026368.1-201ENST00000614934 690 ntBASIC1.75□□□□□ -2.13
USH2AO75445 OR8G7P-201ENST00000616658 848 ntBASIC1.75□□□□□ -2.13
USH2AO75445 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC1.75□□□□□ -2.13
USH2AO75445 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC1.75□□□□□ -2.13
USH2AO75445 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC1.75□□□□□ -2.13
USH2AO75445 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 176.6 ms