Protein–RNA interactions for Protein: O00560

SDCBP, Syntenin-1, humanhuman

Predicted RBP Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPO00560 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
SDCBPO00560 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC3.44□□□□□ -1.86
SDCBPO00560 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 RNA5SP322-201ENST00000363617 119 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 SNORD35B-201ENST00000363660 87 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 AC019155.1-201ENST00000382242 574 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 RN7SKP182-201ENST00000410772 298 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC3.43□□□□□ -1.86
SDCBPO00560 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.43□□□□□ -1.86
SDCBPO00560 AC096638.2-201ENST00000434965 711 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 YWHAQP9-201ENST00000445891 512 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 AC107015.1-201ENST00000466902 747 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 RN7SL303P-201ENST00000469773 251 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 RN7SL691P-201ENST00000494487 301 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.43□□□□□ -1.86
SDCBPO00560 KRT19P6-201ENST00000510983 209 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 AC008958.1-201ENST00000511047 682 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 RNU7-143P-201ENST00000516781 65 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.43□□□□□ -1.86
SDCBPO00560 PSMB7P1-201ENST00000556349 514 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.43□□□□□ -1.86
SDCBPO00560 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC3.43□□□□□ -1.86
SDCBPO00560 AC022655.2-201ENST00000577280 318 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 MIR4277-201ENST00000578298 84 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 IPO5P1-202ENST00000600039 287 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 AC104785.1-201ENST00000603220 588 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 MIR486-1-201ENST00000612171 68 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC3.43□□□□□ -1.86
SDCBPO00560 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.43□□□□□ -1.86
SDCBPO00560 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
SDCBPO00560 AC006504.1-201ENST00000562493 3666 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 ERCC6-202ENST00000374127 1782 ntBASIC3.43□□□□□ -1.86
SDCBPO00560 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.42□□□□□ -1.86
SDCBPO00560 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.42□□□□□ -1.86
SDCBPO00560 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 AC027287.1-201ENST00000553115 1453 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AL031985.3-201ENST00000565390 2449 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 RNU1-132P-201ENST00000364300 164 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 RNU6-729P-201ENST00000384399 107 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC3.42□□□□□ -1.86
SDCBPO00560 AL589994.1-201ENST00000404962 340 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.42□□□□□ -1.86
SDCBPO00560 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC3.42□□□□□ -1.86
SDCBPO00560 USP12PY-201ENST00000427677 1064 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 COX6B1P7-201ENST00000430845 235 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.42□□□□□ -1.86
SDCBPO00560 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.42□□□□□ -1.86
SDCBPO00560 RN7SL459P-201ENST00000481078 302 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 RPL29P14-201ENST00000495837 428 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.42□□□□□ -1.86
SDCBPO00560 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SDCBPO00560 AC026726.1-201ENST00000512859 601 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC3.42□□□□□ -1.86
SDCBPO00560 CDH12P4-201ENST00000517835 295 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 CDH12P3-201ENST00000517935 295 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 CDH12P1-201ENST00000518435 295 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 NARSP2-201ENST00000518524 679 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.42□□□□□ -1.86
SDCBPO00560 AC009643.1-201ENST00000532030 391 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 MTND2P17-201ENST00000550281 688 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 HMGB3P26-201ENST00000560051 582 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.42□□□□□ -1.86
SDCBPO00560 AC105036.1-201ENST00000566222 271 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 MIR5096-201ENST00000583713 70 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC3.42□□□□□ -1.86
SDCBPO00560 MRPS35P3-201ENST00000603189 709 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 QTRT1P1-201ENST00000604344 1078 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 MIR6820-201ENST00000611508 62 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AL591424.2-201ENST00000617023 128 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AL121890.3-201ENST00000618494 516 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.42□□□□□ -1.86
SDCBPO00560 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SDCBPO00560 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.42□□□□□ -1.86
SDCBPO00560 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.42□□□□□ -1.86
SDCBPO00560 FAM35DP-201ENST00000323387 2712 ntBASIC3.42□□□□□ -1.86
SDCBPO00560 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SDCBPO00560 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.41□□□□□ -1.86
SDCBPO00560 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC3.41□□□□□ -1.86
SDCBPO00560 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
SDCBPO00560 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.41□□□□□ -1.86
SDCBPO00560 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.41□□□□□ -1.86
SDCBPO00560 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms