Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 RN7SKP44-201ENST00000363602 316 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 SNORA11F-201ENST00000408237 128 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 CEACAMP1-201ENST00000434624 1035 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 NPM1P48-201ENST00000436002 853 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 CASP3P1-201ENST00000446037 609 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 PHBP16-201ENST00000446318 950 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 ABCF2P2-201ENST00000450549 296 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 Z95152.1-201ENST00000453556 656 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 RN7SL98P-201ENST00000462271 300 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 RPL35AP15-201ENST00000468042 339 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 S100A11P1-201ENST00000477525 312 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC109458.1-201ENST00000508858 316 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC009101.1-201ENST00000568135 242 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 MIR4330-201ENST00000579077 105 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC244505.7-201ENST00000599675 272 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC005191.1-201ENST00000603950 358 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 OR6R2P-201ENST00000609216 300 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AL645927.2-201ENST00000618350 349 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AC019278.1-201ENST00000623516 479 ntBASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
HLA-DRB4X5D2U9 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC3.21□□□□□ -1.89
HLA-DRB4X5D2U9 AC053481.2-202ENST00000582394 1500 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 FAM3C2-201ENST00000312214 681 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 RPL23AP59-201ENST00000399415 461 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 RPS27AP7-201ENST00000422792 455 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 FTH1P16-201ENST00000435241 552 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 EXTL2P1-201ENST00000446218 416 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 snoU13.1-201ENST00000459157 104 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 RN7SL738P-201ENST00000470264 297 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 RN7SL585P-201ENST00000470538 280 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 RFPL1S-203ENST00000539579 330 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 AC091515.1-201ENST00000548110 679 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 MIR6820-201ENST00000611508 62 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 PHKBP1-201ENST00000450951 1951 ntBASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
HLA-DRB4X5D2U9 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 ACTR3BP2-202ENST00000623630 1338 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC008725.1-201ENST00000605123 2263 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 MIR331-201ENST00000362302 94 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 RNU1-87P-201ENST00000363727 170 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 RNA5SP447-201ENST00000363749 119 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC097374.1-203ENST00000400783 485 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 ELOCP19-201ENST00000411919 318 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AL161631.1-201ENST00000417933 486 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AL139095.3-201ENST00000419672 1203 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC093698.1-201ENST00000423843 571 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC115285.1-201ENST00000424879 736 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 USP12PY-201ENST00000427677 1064 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AL365396.1-201ENST00000430854 671 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AL512326.1-201ENST00000443050 721 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 YWHAQP9-201ENST00000445891 512 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 RPL23AP24-201ENST00000458203 385 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 RPS20P4-201ENST00000461659 355 ntBASIC3.2□□□□□ -1.9
HLA-DRB4X5D2U9 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms