Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MTND3P7-201ENST00000474435 343 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC015724.1-201ENST00000478577 156 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 HNRNPKP5-201ENST00000515300 253 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 RNU6-1225P-201ENST00000516336 65 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 RN7SKP99-201ENST00000517028 307 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC108515.1-201ENST00000517407 525 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 HIGD1AP5-201ENST00000529959 259 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 OR8G3P-201ENST00000533406 921 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC126177.5-201ENST00000549599 178 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 LYZ-203ENST00000549690 669 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 OR11J2P-201ENST00000555298 907 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AP005403.1-201ENST00000579720 229 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 MIR4436B2-201ENST00000581415 91 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 MIR4436B1-201ENST00000583272 91 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC087763.1-201ENST00000603391 286 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AL590229.1-201ENST00000603497 542 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC097505.1-201ENST00000610199 565 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC008121.2-201ENST00000614647 523 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC091931.1-201ENST00000623488 728 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 DCAF13P3-201ENST00000561147 1334 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
PCDHB1Q9Y5F3 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC023421.1-201ENST00000590535 1785 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL512646.1-201ENST00000269395 1077 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 MIR217-201ENST00000384817 110 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 RNU6-1300P-201ENST00000391046 108 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL078595.1-201ENST00000404458 226 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 GPS2P1-201ENST00000411761 986 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL133325.1-201ENST00000421090 382 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 RPP40P1-201ENST00000426762 456 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC007559.1-201ENST00000428736 355 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC005033.1-201ENST00000428904 813 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC098826.1-201ENST00000433943 471 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 PSMD10P3-201ENST00000437000 448 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 ISCA1P2-201ENST00000438679 421 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL772161.1-201ENST00000439130 476 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 TXNP5-201ENST00000441043 315 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 ANKRD30BP3-201ENST00000444850 1070 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC009961.3-201ENST00000449832 765 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC097262.1-201ENST00000452559 548 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 RPL37P3-201ENST00000456825 293 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 MTND4LP3-201ENST00000468320 276 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 RAP1BP2-201ENST00000478270 544 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC048346.1-201ENST00000510247 144 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC117532.1-201ENST00000514638 323 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 GTF2IP8-201ENST00000560687 584 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC133644.2-201ENST00000608142 540 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC000068.2-201ENST00000608816 460 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 AC126915.2-201ENST00000610957 190 ntBASIC5.4□□□□□ -1.54
PCDHB1Q9Y5F3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.4□□□□□ -1.55
PCDHB1Q9Y5F3 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.4□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms