Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 U3.22-201ENST00000391120 215 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 RPS27AP11-201ENST00000402798 447 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 SNORA11-201ENST00000408789 128 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 RNU6-603P-201ENST00000411403 107 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 ZFAND6P1-201ENST00000434138 605 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 MTND2P25-201ENST00000449028 610 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 HMGB1P5-202ENST00000451497 985 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC009963.2-201ENST00000453431 138 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC005229.2-201ENST00000456995 399 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 MTND2P28-201ENST00000457540 1044 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC103987.1-201ENST00000473394 348 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC013356.1-201ENST00000489027 564 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC005912.1-201ENST00000495392 255 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC010627.1-201ENST00000503819 1294 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 RNU6-1004P-201ENST00000516584 111 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC008694.2-201ENST00000517591 306 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC069240.1-201ENST00000548774 375 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 DYNLL1P4-201ENST00000549314 266 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC008759.1-201ENST00000589783 983 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 HMGB2P1-201ENST00000591146 634 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AL096803.3-201ENST00000609032 532 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC116447.1-201ENST00000613153 453 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC016957.2-201ENST00000616998 848 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 LINC00901.1-201ENST00000617252 152 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AP004607.9-201ENST00000618202 316 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 AC007342.8-201ENST00000623278 678 ntBASIC4.26□□□□□ -1.73
RNF6Q9Y252 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF6Q9Y252 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF6Q9Y252 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
RNF6Q9Y252 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC090017.1-201ENST00000548612 1779 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 RPAP2-203ENST00000610020 16993 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 FAM3C2-201ENST00000312214 681 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 OR52B1P-201ENST00000316506 909 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC011155.1-201ENST00000316512 456 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 MIR129-1-201ENST00000384972 72 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 ATG4AP1-201ENST00000416893 538 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AL160175.1-201ENST00000428124 247 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC092013.1-201ENST00000438795 332 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 XKRY2-201ENST00000442362 1093 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 RPL7P33-201ENST00000444159 742 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 RPS27AP15-201ENST00000447672 466 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC090013.1-201ENST00000485147 480 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 CKS1BP1-201ENST00000555221 240 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC027176.2-201ENST00000559166 746 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC018552.3-201ENST00000567416 561 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 RN7SL802P-201ENST00000577858 299 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 MIR548Y-201ENST00000582739 110 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC091178.1-203ENST00000584586 279 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 RPL12P25-202ENST00000598100 674 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 SUMO2P14-201ENST00000604488 293 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC008966.2-201ENST00000606157 453 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC055764.2-201ENST00000610089 670 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AL354696.1-201ENST00000614652 497 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AC107308.1-201ENST00000615897 301 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AL158196.1-201ENST00000616786 434 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 AL442639.1-201ENST00000625030 1899 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 MTND4P26-201ENST00000415971 1359 ntBASIC4.25□□□□□ -1.73
RNF6Q9Y252 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF6Q9Y252 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.25□□□□□ -1.73
RNF6Q9Y252 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RNF6Q9Y252 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms