Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
CLIP2Q9UDT6 AL158163.1-201ENST00000603915 1649 ntBASIC5.14□□□□□ -1.59
CLIP2Q9UDT6 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
CLIP2Q9UDT6 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP2Q9UDT6 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC5.14□□□□□ -1.59
CLIP2Q9UDT6 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP2Q9UDT6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CLIP2Q9UDT6 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 RNA5SP52-201ENST00000362448 134 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 RNU6-984P-201ENST00000363236 109 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 HSPD1P16-201ENST00000402302 394 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AMZ2P2-201ENST00000406819 1057 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AC004975.1-201ENST00000428733 208 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 Z85994.2-201ENST00000434327 452 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AC114495.1-201ENST00000441274 436 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 UQCRHP4-201ENST00000471686 272 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 OR5BC1P-201ENST00000529327 739 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AC012213.4-201ENST00000606457 354 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AP002360.3-201ENST00000607673 710 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AL391597.1-201ENST00000618707 694 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 MIR3653-201ENST00000625572 110 ntBASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.13□□□□□ -1.59
CLIP2Q9UDT6 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC087565.3-202ENST00000642085 1603 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC067945.1-201ENST00000342609 618 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 RNU6-386P-201ENST00000362650 107 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 MIR708-201ENST00000390708 88 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AL583835.1-201ENST00000399570 407 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC093084.1-201ENST00000424233 687 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 SKP1P3-201ENST00000429280 487 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AL162388.1-201ENST00000450912 352 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 NUTF2P7-201ENST00000453086 375 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 RPL35AP15-201ENST00000468042 339 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 MTND3P6-201ENST00000485242 339 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 HMGB3P13-201ENST00000511263 607 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 MYL12AP1-201ENST00000518490 515 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC020910.2-201ENST00000603635 610 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AL160290.3-201ENST00000604869 165 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 BNIP3P7-201ENST00000605641 516 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC015722.2-201ENST00000622210 551 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 ALG13-230ENST00000623189 458 ntTSL 3 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC140479.6-201ENST00000633535 357 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 AC009951.1-201ENST00000623674 2614 ntBASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
CLIP2Q9UDT6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AL121657.1-201ENST00000327215 531 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 RNA5SP22-201ENST00000365393 109 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 VN1R8P-201ENST00000407739 893 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AC062016.2-201ENST00000420950 676 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AJ239321.1-201ENST00000424255 564 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 CDY14P-201ENST00000431260 1014 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 CDY12P-201ENST00000440679 1015 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 CDY13P-201ENST00000445813 1015 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 CDY23P-201ENST00000451661 1014 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 DDX39BP2-208ENST00000453923 258 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AC010469.1-201ENST00000463864 576 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 RN7SL812P-201ENST00000493791 279 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 SEC11B-201ENST00000518383 499 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 TOMM20P2-201ENST00000540082 421 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AC025884.1-201ENST00000556034 378 ntBASIC5.11□□□□□ -1.59
CLIP2Q9UDT6 AL354984.3-201ENST00000604803 325 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms