Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 NACAP2-201ENST00000318548 624 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 RPL7P26-201ENST00000333817 754 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 RNU1-146P-201ENST00000364015 165 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.257-201ENST00000364596 102 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-209P-201ENST00000384118 107 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-1026P-201ENST00000384465 108 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 SNORD3H-201ENST00000384486 214 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 PDCL3P5-201ENST00000398028 722 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AL033519.1-201ENST00000407266 307 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 RNA5SP280-201ENST00000411230 115 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC009302.1-201ENST00000417147 390 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AL451054.2-201ENST00000420896 202 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC234771.4-201ENST00000441416 730 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 MTCO1P42-201ENST00000457379 726 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 BX323845.2-201ENST00000458382 234 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.635-201ENST00000459041 101 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC013356.1-201ENST00000489027 564 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 NPM1P41-201ENST00000512920 831 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 Vault.3-201ENST00000516676 95 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 RNU6-789P-201ENST00000517105 102 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 RN7SKP183-201ENST00000517169 324 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC068831.6-201ENST00000560522 795 ntTSL 3 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AL359091.2-201ENST00000609303 556 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 MIR7109-201ENST00000613748 65 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC007603.3-201ENST00000636915 979 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 MIR548A1HG-202ENST00000637804 784 ntTSL 5 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AL596275.2-208ENST00000641192 594 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 AC119744.1-201ENST00000454746 1715 ntBASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 SLMAP-202ENST00000295952 4420 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
CUEDC1Q9NWM3 DMTF1-213ENST00000432937 2411 ntTSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ZNF268-209ENST00000541009 3773 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ALS2CR12-207ENST00000439709 1626 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 CAGE1-203ENST00000379918 2877 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 RIOK3P1-201ENST00000418778 1528 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.112-201ENST00000363250 102 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.135-201ENST00000363439 95 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 Y_RNA.187-201ENST00000363918 113 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AL390316.1-201ENST00000406279 553 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 GSTM3P2-201ENST00000412746 530 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 COX6CP17-201ENST00000421389 185 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC005517.2-201ENST00000424673 553 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AL158073.1-201ENST00000426848 1104 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC018804.1-201ENST00000430381 618 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 RPEP2-201ENST00000432149 701 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 USP24P1-201ENST00000433802 779 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 MRPS21P3-201ENST00000436696 262 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 RPEP4-201ENST00000437636 602 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC006335.2-201ENST00000437993 330 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 AC002504.1-201ENST00000438281 691 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 RPL12P49-201ENST00000441100 121 ntBASIC6.72□□□□□ -1.33
CUEDC1Q9NWM3 HBG2-204ENST00000444587 307 ntTSL 2 BASIC6.72□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms