Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC119744.1-201ENST00000454746 1715 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AL136164.3-201ENST00000624429 3978 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 CASC19-204ENST00000641001 2055 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AP001642.1-201ENST00000624727 2117 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AL355852.1-201ENST00000454081 1771 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC073055.1-201ENST00000456901 1621 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 RNU6-354P-201ENST00000383862 107 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 RNU6-610P-201ENST00000384264 107 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 IL6-206ENST00000407492 926 ntTSL 3 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 DEFB130D-201ENST00000426866 237 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AL049745.1-201ENST00000433953 286 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC023347.2-201ENST00000433994 462 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC009263.1-201ENST00000441193 1239 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 ISCUP1-201ENST00000454451 448 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 SCARNA10-201ENST00000459255 330 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 RN7SL610P-201ENST00000463845 291 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 RPL12P20-201ENST00000475538 479 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC231760.1-201ENST00000498002 260 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC078880.5-201ENST00000617845 421 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 AC092608.3-201ENST00000625017 386 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 SMG1P4-204ENST00000523028 4131 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 LINC01109-201ENST00000603837 3081 ntBASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
BLOC1S4Q9NUP1 MTCO1P6-201ENST00000481192 1384 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC093591.2-201ENST00000565254 3843 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AL391684.1-202ENST00000641293 1636 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC021146.4-201ENST00000309229 279 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 RNVU1-6-201ENST00000364688 164 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 RNA5SP151-201ENST00000365632 117 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 RNU6-468P-201ENST00000384003 109 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 HMGB3P19-201ENST00000403971 560 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 HNRNPDP2-201ENST00000406475 478 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 RBMY2KP-201ENST00000418221 992 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC241520.1-201ENST00000422654 1099 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 RPL30P3-201ENST00000424262 333 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AL138785.1-201ENST00000425821 331 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 CEACAMP1-201ENST00000434624 1035 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC092809.1-201ENST00000441469 474 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 HSFY3P-201ENST00000444242 1191 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AL049829.1-201ENST00000465411 156 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC092902.1-201ENST00000486999 259 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 RPS4XP18-201ENST00000495480 763 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 FTH1P24-201ENST00000503502 462 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 AC098799.3-201ENST00000506095 438 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 IGBP1P5-201ENST00000507524 1000 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 RNA5SP446-201ENST00000515955 82 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 HMGB1P23-201ENST00000518743 568 ntBASIC5.16□□□□□ -1.58
BLOC1S4Q9NUP1 NPM1P6-201ENST00000521088 871 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms