Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 RNA5SP515-201ENST00000364570 118 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 SNORA70C-201ENST00000384538 135 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 MIR513A2-201ENST00000385249 127 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 MRPL50P1-201ENST00000431951 384 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 RPS4XP4-201ENST00000443195 763 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 RN7SL604P-201ENST00000492589 296 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 HPRT1P2-201ENST00000505250 544 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 OR8K2P-201ENST00000524645 927 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 OR10D4P-201ENST00000525892 951 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AC024341.1-201ENST00000526444 1552 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 MIR4697-201ENST00000582977 78 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 AC068831.8-201ENST00000620171 435 ntBASIC5.95□□□□□ -1.46
SIN3AQ96ST3 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
SIN3AQ96ST3 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC021242.1-201ENST00000507315 2035 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC016588.2-201ENST00000632484 3021 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 RNU6-618P-201ENST00000363518 112 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 RNU6-883P-201ENST00000384597 107 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AL022722.2-201ENST00000402519 180 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 PGBD4P8-201ENST00000412993 562 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AL606490.8-201ENST00000441624 319 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 RPS11P1-201ENST00000451072 473 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 RPL10P17-201ENST00000453852 316 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 RN7SL585P-201ENST00000470538 280 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC135999.1-201ENST00000478962 479 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC006517.1-201ENST00000480485 328 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AC010857.1-201ENST00000606398 594 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 SNX18P1Y-201ENST00000616231 511 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AL162233.1-201ENST00000620014 944 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 AL022322.2-201ENST00000624072 20397 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 CDY11P-201ENST00000447168 1651 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.94□□□□□ -1.46
SIN3AQ96ST3 MTCO1P7-201ENST00000419523 1542 ntBASIC5.94□□□□□ -1.46
SIN3AQ96ST3 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 RNU6-152P-201ENST00000384037 107 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AL358176.3-201ENST00000420757 454 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AL390879.2-203ENST00000426943 1121 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 MTND4P15-201ENST00000437913 1033 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 RPL23AP46-201ENST00000438548 490 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 HGF-207ENST00000453018 721 ntTSL 3 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 EIF2S2P5-201ENST00000457635 968 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 RPS7P7-201ENST00000463499 571 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AC117525.1-201ENST00000515228 503 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 IFITM8P-201ENST00000522529 394 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AC110743.1-201ENST00000584870 478 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 MIR5684-201ENST00000585074 65 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AC067959.1-201ENST00000604334 379 ntBASIC5.93□□□□□ -1.46
SIN3AQ96ST3 AC012603.1-201ENST00000606424 528 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.2 ms