Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC011933.1-201ENST00000413334 321 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 P2RY10P2-201ENST00000416730 913 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC116533.1-201ENST00000459748 321 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 RPL35AP15-201ENST00000468042 339 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 RN7SL303P-201ENST00000469773 251 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 MTND3P6-201ENST00000485242 339 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC021146.3-201ENST00000511911 260 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 OR5BC1P-201ENST00000529327 739 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 ATP5J2P6-201ENST00000565203 266 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC010200.2-201ENST00000605098 235 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AL445423.1-201ENST00000609941 536 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC140113.4-201ENST00000622087 222 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC140479.6-201ENST00000633535 357 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC114546.3-201ENST00000623582 1734 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 AC009951.1-201ENST00000623674 2614 ntBASIC4.51□□□□□ -1.69
RPRD1AQ96P16 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.51□□□□□ -1.69
RPRD1AQ96P16 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 EIF2AP4-201ENST00000424793 1781 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 USP9YP4-201ENST00000424401 1745 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 AC068254.2-201ENST00000623938 3577 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 SNORA11F-201ENST00000408237 128 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 SNORA74C-2-201ENST00000411179 201 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 CHIAP3-201ENST00000423668 1133 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 RPL23AP52-201ENST00000439311 478 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 RPL7AP52-201ENST00000458096 790 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 PSMC1P13-201ENST00000458195 985 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 MYL12AP1-201ENST00000518490 515 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 VTA1P2-201ENST00000520205 911 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 AC092868.3-201ENST00000560515 784 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 AC025175.1-201ENST00000606482 759 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 AP003497.2-201ENST00000624220 967 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 FP325313.1-201ENST00000638228 703 ntBASIC4.5□□□□□ -1.69
RPRD1AQ96P16 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
RPRD1AQ96P16 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 FAM3C2-201ENST00000312214 681 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 RNA5SP175-201ENST00000364275 119 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 SNORA62-201ENST00000365493 153 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 RNU6-225P-201ENST00000384613 103 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 MIR195-201ENST00000385194 87 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC097374.1-203ENST00000400783 485 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AL078604.1-201ENST00000404609 466 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 COX6CP17-201ENST00000421389 185 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 OR6K4P-201ENST00000423179 955 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AL132765.1-201ENST00000434165 553 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 MAPRE1P3-201ENST00000435438 796 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 RAD1P2-201ENST00000446414 663 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 RPS27AP15-201ENST00000447672 466 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 VN1R48P-201ENST00000448149 1036 ntBASIC4.49□□□□□ -1.69
RPRD1AQ96P16 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.49□□□□□ -1.69
RPRD1AQ96P16 AC010469.1-201ENST00000463864 576 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms