Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AL391994.1-201ENST00000254724 282 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RNU6-931P-201ENST00000363850 107 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RNA5SP90-201ENST00000364801 99 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 Y_RNA.408-201ENST00000383987 102 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RNU1-106P-201ENST00000384382 164 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 MIR589-201ENST00000385238 99 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AL161909.1-201ENST00000397390 712 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 SPTLC1P2-201ENST00000407089 121 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC019050.1-201ENST00000418508 492 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RPL7AP49-201ENST00000429522 581 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RPL7P4-203ENST00000430239 730 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RPS24P8-201ENST00000431490 402 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AL591438.1-201ENST00000433508 581 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 KCTD10P1-201ENST00000434203 625 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 CBX1P4-201ENST00000439415 457 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC090804.1-201ENST00000448870 490 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RPL12P26-201ENST00000452430 487 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC022133.1-201ENST00000490961 571 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 SNRPCP2-201ENST00000504370 475 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 OR5M14P-201ENST00000506803 618 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 HMGB3P13-201ENST00000511263 607 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC109471.1-201ENST00000511631 612 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RNU6-1225P-201ENST00000516336 65 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC027308.1-201ENST00000517993 110 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 RPL12P22-201ENST00000519073 490 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC022360.1-201ENST00000521058 340 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC092709.1-201ENST00000521355 1045 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AL121766.1-201ENST00000547436 487 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 GTF2IP8-201ENST00000560687 584 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC012435.1-202ENST00000568772 240 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 OR4K7P-201ENST00000580232 945 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AL031985.2-201ENST00000600955 480 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AP001981.2-201ENST00000603241 418 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC011626.1-201ENST00000604710 562 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC018926.3-201ENST00000618841 406 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 AC018445.2-201ENST00000622987 260 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 SAMMSON-227ENST00000642114 1199 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 ANKRD20A17P-201ENST00000511745 1330 ntBASIC5.2□□□□□ -1.58
SCAMP4Q969E2 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SCAMP4Q969E2 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 AL450345.1-202ENST00000605741 3881 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 RNU6-619P-201ENST00000365146 108 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 RNU2-42P-201ENST00000410697 113 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 ATP6V1G1P7-201ENST00000415853 349 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 RPL19P16-201ENST00000433839 588 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 NPM1P18-201ENST00000434232 732 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 AL031663.1-201ENST00000437445 219 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 RPS29P10-201ENST00000439197 166 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 AL122008.1-201ENST00000456078 452 ntTSL 3 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 RPL7AP52-201ENST00000458096 790 ntBASIC5.19□□□□□ -1.58
SCAMP4Q969E2 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.19□□□□□ -1.58
SCAMP4Q969E2 RPL23AP12-201ENST00000467573 473 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms