Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 IL31RA-207ENST00000490985 2414 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 HEATR4-202ENST00000553558 3523 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
HLA-CQ95604 BROX-201ENST00000340934 4124 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
HLA-CQ95604 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC7.19□□□□□ -1.26
HLA-CQ95604 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC7.19□□□□□ -1.26
HLA-CQ95604 AC090220.1-201ENST00000593078 1699 ntBASIC7.19□□□□□ -1.26
HLA-CQ95604 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC7.19□□□□□ -1.26
HLA-CQ95604 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 KIAA1324L-203ENST00000416314 3179 ntAPPRIS P3 TSL 2 BASIC7.18□□□□□ -1.26
HLA-CQ95604 VTCN1-203ENST00000369458 2612 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 TNPO1-201ENST00000337273 11183 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 KCNJ15-221ENST00000613499 3049 ntAPPRIS P1 TSL 4 BASIC7.18□□□□□ -1.26
HLA-CQ95604 PDE4DIP-205ENST00000369354 8262 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 EIF4E3-204ENST00000425534 9949 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
HLA-CQ95604 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 ZMYND8-216ENST00000471951 4053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 UBA2-202ENST00000439527 2802 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AL512329.1-201ENST00000404600 1592 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 RNA5SP321-201ENST00000362722 111 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 Y_RNA.257-201ENST00000364596 102 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 RNA5SP510-201ENST00000364697 99 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 SNORA17A-201ENST00000391185 133 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AL031985.1-201ENST00000392713 418 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AL590143.1-201ENST00000405071 138 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 RNU2-3P-201ENST00000410144 191 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AC079355.1-201ENST00000421770 223 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 FABP7P2-201ENST00000429946 379 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AL590128.1-201ENST00000433407 286 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 YWHAEP1-201ENST00000453697 763 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AC079168.1-201ENST00000458741 345 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 RN7SL180P-201ENST00000466769 294 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC7.18□□□□□ -1.26
HLA-CQ95604 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 RGS5-220ENST00000528689 566 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AP000676.2-201ENST00000529711 301 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AC127526.3-201ENST00000534291 450 ntTSL 3 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
HLA-CQ95604 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AL512782.1-201ENST00000603093 364 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AL670379.11-201ENST00000604059 253 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AL670379.10-201ENST00000604330 253 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AL670379.12-201ENST00000605291 253 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AL670379.9-201ENST00000605428 253 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AL355333.1-201ENST00000605632 279 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC7.18□□□□□ -1.26
HLA-CQ95604 SNORA17.5-201ENST00000630429 132 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AL008638.3-201ENST00000623027 5182 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC7.18□□□□□ -1.26
HLA-CQ95604 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 AC078795.1-201ENST00000602342 3143 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 ZNF544-206ENST00000596652 2818 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 ZNF544-217ENST00000600220 2837 ntAPPRIS ALT2 TSL 3 BASIC7.18□□□□□ -1.26
HLA-CQ95604 ZNF806-201ENST00000438300 1774 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 AC009948.3-201ENST00000603415 1798 ntBASIC7.18□□□□□ -1.26
HLA-CQ95604 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC7.18□□□□□ -1.26
HLA-CQ95604 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HLA-CQ95604 NACA-216ENST00000550952 2922 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 FER-202ENST00000438717 1531 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 TROVE2-205ENST00000367446 3081 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 AL031594.1-201ENST00000417123 1932 ntTSL 2 BASIC7.17□□□□□ -1.26
HLA-CQ95604 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 STK4-202ENST00000372806 6342 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 TTC7B-201ENST00000328459 19458 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 RNU6-1115P-201ENST00000362490 106 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 RNU6-552P-201ENST00000362869 119 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 Y_RNA.80-201ENST00000362996 102 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 SNORD113-7-201ENST00000363762 77 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 SNORA68-201ENST00000384437 133 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 RNU6-903P-201ENST00000391270 109 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 MIR548I3-201ENST00000408378 149 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 MIR548I1-201ENST00000408810 149 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-CQ95604 RPS3P2-201ENST00000421346 701 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 RPL31P12-201ENST00000422587 358 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-CQ95604 RPL6-202ENST00000424576 1074 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HLA-CQ95604 AC096632.1-201ENST00000427395 310 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC7.17□□□□□ -1.26
HLA-CQ95604 OR4K11P-201ENST00000431829 904 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 RNU7-182P-201ENST00000459009 62 ntBASIC7.17□□□□□ -1.26
HLA-CQ95604 RPL7L1P8-201ENST00000469911 741 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.4 ms