Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 AC010329.2-201ENST00000595195 2737 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 MAPK10-338ENST00000641647 3362 ntBASIC5.07□□□□□ -1.6
HMGB4Q8WW32 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
HMGB4Q8WW32 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC000367.1-201ENST00000452711 1766 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC009962.1-201ENST00000567327 3813 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 MTND4P8-201ENST00000514997 1362 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC079741.1-201ENST00000321498 212 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 OR52E6-202ENST00000379946 954 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 GLULP6-201ENST00000399502 913 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 RN7SKP199-201ENST00000410325 305 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 RNU6-575P-201ENST00000411326 105 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 OR4K6P-201ENST00000416478 897 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 TRGV6-201ENST00000417928 299 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC069213.2-201ENST00000420238 366 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC004074.1-201ENST00000421810 1063 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 RPL12P28-201ENST00000430852 489 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC093166.2-201ENST00000455969 1017 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 IGBP1P5-201ENST00000507524 1000 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 DUXAP5-201ENST00000529668 529 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC044913.1-201ENST00000557200 430 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 MTND4LP24-201ENST00000572277 291 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 MIR4666A-201ENST00000580160 79 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 VN1R84P-201ENST00000593697 235 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AL512782.1-201ENST00000603093 364 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 NTAN1P1-201ENST00000603150 646 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC016877.3-201ENST00000606778 504 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AL445423.1-201ENST00000609941 536 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC243654.2-201ENST00000612843 443 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC021755.4-201ENST00000616620 456 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AP002791.1-201ENST00000623291 381 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC005618.4-201ENST00000625053 554 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AC046144.1-201ENST00000478559 1853 ntBASIC5.06□□□□□ -1.6
HMGB4Q8WW32 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
HMGB4Q8WW32 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 BX005019.1-201ENST00000561881 1810 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 A2MP1-204ENST00000566278 4130 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 OR1L1-202ENST00000373686 1083 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 SNORA2.3-201ENST00000383920 135 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 SNORA70.6-201ENST00000383934 134 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 U3.23-201ENST00000391132 200 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC005005.2-201ENST00000420779 380 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.05□□□□□ -1.6
HMGB4Q8WW32 RPS27AP6-201ENST00000427962 448 ntBASIC5.05□□□□□ -1.6
HMGB4Q8WW32 AC007559.1-201ENST00000428736 355 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms