Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 GTF2IP13-201ENST00000438487 386 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 PA2G4P1-201ENST00000442248 1197 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 LINC00578-202ENST00000442937 612 ntTSL 3 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 GTF2F2P2-201ENST00000445825 721 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 NPPA-AS1-202ENST00000446542 1032 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC092421.1-201ENST00000448148 418 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AL035090.1-201ENST00000454835 332 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AP003497.1-201ENST00000528472 562 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC078860.1-201ENST00000546601 527 ntTSL 2 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC090241.1-201ENST00000587732 621 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC023206.1-201ENST00000605824 298 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 PTCHD3P1-201ENST00000612350 537 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 XPNPEP3-206ENST00000614001 230 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 Metazoa_SRP.167-201ENST00000614947 260 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC005899.7-201ENST00000618199 588 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 ZRANB2-AS2-220ENST00000623721 1133 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 AC009902.3-201ENST00000606235 2172 ntBASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 ZFP62-207ENST00000512132 4010 ntTSL 2 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
DEPDC4Q8N2C3 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 IL5RA-201ENST00000256452 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 SNORA73B-201ENST00000363217 204 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 SERPINB12-202ENST00000382768 1278 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 MIR92A2-201ENST00000385299 75 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 RPL26P29-201ENST00000415623 438 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 CHEK2P3-201ENST00000416118 248 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC073136.2-201ENST00000417282 849 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC012065.2-201ENST00000421295 375 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 PMS2P9-201ENST00000441237 515 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC012512.1-201ENST00000446594 718 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AL355483.3-201ENST00000446686 752 ntTSL 3 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 PRDX1P1-201ENST00000449329 596 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 Y_RNA.639-201ENST00000458981 102 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC006511.1-201ENST00000470614 315 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 IGBP1P4-201ENST00000503202 879 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC091885.1-201ENST00000506658 268 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC021146.1-201ENST00000511202 716 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC114797.1-201ENST00000514003 728 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 RNU4-29P-201ENST00000515943 174 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 OR5M6P-201ENST00000530227 937 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC073571.1-201ENST00000549103 475 ntTSL 3 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 MIR3171-201ENST00000584270 74 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 UBE2L4-201ENST00000587688 464 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 GLUD1P4-201ENST00000590914 418 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 ZNF415-218ENST00000599261 601 ntTSL 3 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC093838.1-201ENST00000613014 469 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 LINC00923-204ENST00000614972 1181 ntTSL 5 BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 pRNA.9-201ENST00000618609 89 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC011978.2-201ENST00000569835 2054 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 USP37-203ENST00000415516 4516 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 CASC19-246ENST00000641625 1606 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 AC004972.1-201ENST00000623934 2209 ntBASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 POT1-AS1-204ENST00000449642 3238 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
DEPDC4Q8N2C3 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 AC007342.5-201ENST00000571340 2142 ntBASIC6.56□□□□□ -1.36
DEPDC4Q8N2C3 CIR1-201ENST00000342016 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms