Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 DBIP1-201ENST00000401435 260 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 RNA5SP296-201ENST00000410523 111 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 GPS2P1-201ENST00000411761 986 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AL136133.1-201ENST00000413694 376 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 SRSF1P1-201ENST00000424058 520 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 IPMKP1-201ENST00000425988 855 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 USP9YP28-201ENST00000435142 589 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC105402.2-201ENST00000438503 358 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AL390119.1-201ENST00000440329 312 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC016772.1-201ENST00000444170 1261 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 FAR2P1-206ENST00000449736 709 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 ATG12P2-201ENST00000456830 416 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC100832.1-201ENST00000471945 383 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 RPS24P16-201ENST00000497294 392 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 RN7SL466P-201ENST00000497546 295 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC021193.1-201ENST00000511607 420 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC118465.1-201ENST00000513820 1271 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 HMGN1P9-201ENST00000515212 298 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 OR5M2P-201ENST00000529003 936 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 VN1R82P-201ENST00000601481 356 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AP000769.2-201ENST00000602344 396 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC133552.5-201ENST00000604266 540 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC135068.5-201ENST00000624197 983 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 MIR4278-201ENST00000636094 69 ntBASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
KRT78Q8N1N4 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AL078621.3-201ENST00000623707 2042 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 MIR323A-201ENST00000362199 86 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 RN7SKP69-201ENST00000365390 305 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 DSTNP4-201ENST00000399472 474 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 HSPA8P15-201ENST00000401676 786 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 MTCO3P31-201ENST00000405526 789 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC008280.1-201ENST00000418851 412 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 RPL7P44-201ENST00000424827 742 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 USP9YP11-201ENST00000427537 717 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 TRIM60P3Y-201ENST00000432201 673 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 CYCSP12-201ENST00000437729 300 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 RPL12P11-201ENST00000439970 501 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 MTCO2P3-201ENST00000442543 421 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AP000281.1-201ENST00000444036 316 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 GAPDHP25-201ENST00000447061 1001 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AL591623.2-201ENST00000449978 222 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 ART2BP-201ENST00000453501 499 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 RN7SL717P-201ENST00000478343 297 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 RPL7P18-201ENST00000478965 734 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC5.19□□□□□ -1.58
KRT78Q8N1N4 AC022360.1-201ENST00000521058 340 ntBASIC5.19□□□□□ -1.58
KRT78Q8N1N4 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms