Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
VPS13CQ709C8 SNORD66.1-201ENST00000391230 76 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC012158.1-204ENST00000483430 465 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC008833.1-201ENST00000611633 691 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 OTUD4P1-201ENST00000237841 3067 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 AL161431.1-201ENST00000618966 4205 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 PTP4A1P3-201ENST00000433661 420 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 RPS3AP14-201ENST00000483907 780 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC005726.1-201ENST00000494679 427 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 FTH1P24-201ENST00000503502 462 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC010285.3-201ENST00000511668 676 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC007656.2-201ENST00000624902 4547 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 OR51H2P-202ENST00000641424 3046 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC005326.1-201ENST00000429197 123 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 RPL7P24-201ENST00000493052 752 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC007599.1-201ENST00000568688 1174 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
VPS13CQ709C8 AC007823.1-201ENST00000569932 1566 ntBASIC3.17□□□□□ -1.9
VPS13CQ709C8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
VPS13CQ709C8 SNORD17-201ENST00000390930 237 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 MRPL35P4-201ENST00000453682 566 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 RPL5P23-201ENST00000496040 868 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 GNRHR2P1-201ENST00000555315 631 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 RPL23AP87-202ENST00000573039 466 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC022655.2-201ENST00000577280 318 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC133552.5-201ENST00000604266 540 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS13CQ709C8 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS13CQ709C8 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS13CQ709C8 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC090337.1-201ENST00000579651 2074 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 NACA3P-201ENST00000359690 648 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 SNORA5.1-201ENST00000384275 131 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC009963.4-201ENST00000448535 339 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC097462.2-201ENST00000504623 481 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC127024.5-201ENST00000580085 462 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC012417.1-201ENST00000582307 1039 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC125494.3-201ENST00000602759 455 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 MIR8057-201ENST00000620957 69 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC124312.6-202ENST00000623624 418 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 ATE1-AS1-202ENST00000636460 506 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS13CQ709C8 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS13CQ709C8 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
VPS13CQ709C8 HMGB1P37-201ENST00000439613 609 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 RPS27AP15-201ENST00000447672 466 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC118465.1-201ENST00000513820 1271 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC084759.1-201ENST00000561168 290 ntBASIC3.16□□□□□ -1.9
VPS13CQ709C8 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 DMD-202ENST00000343523 5623 ntTSL 5 BASIC3.16□□□□□ -1.9
VPS13CQ709C8 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
VPS13CQ709C8 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 RNA5SP120-201ENST00000410900 112 ntBASIC3.15□□□□□ -1.9
VPS13CQ709C8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.15□□□□□ -1.9
VPS13CQ709C8 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms