Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 LINC01109-201ENST00000603837 3081 ntBASIC4.15□□□□□ -1.75
NIPAL3Q6P499 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
NIPAL3Q6P499 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC135352.1-201ENST00000506173 1418 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC074029.4-201ENST00000624796 1859 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 METTL21EP-201ENST00000298105 713 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 SNORA71.2-201ENST00000364941 134 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 UBE2V1P15-201ENST00000407776 448 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AP000357.1-201ENST00000409926 1165 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 TATDN1P1-201ENST00000414123 891 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 DYNLL1P7-201ENST00000429273 258 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 BX119904.1-201ENST00000432026 348 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 PTP4A1P3-201ENST00000433661 420 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 RPL7P29-201ENST00000437151 728 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 MTCYBP21-201ENST00000443300 1113 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AL935212.3-201ENST00000450729 284 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 RPL37P3-201ENST00000456825 293 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC104763.1-201ENST00000475274 360 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 PCNAP1-202ENST00000595299 752 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC079610.2-201ENST00000604818 690 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 AC108467.2-201ENST00000617640 1597 ntBASIC4.14□□□□□ -1.75
NIPAL3Q6P499 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
NIPAL3Q6P499 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 RNU1-94P-201ENST00000362627 173 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 RN7SKP106-201ENST00000410832 272 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 ATG4AP1-201ENST00000416893 538 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AC234782.4-201ENST00000417646 1048 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 CYCSP10-201ENST00000417973 294 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 USP9YP9-201ENST00000429406 715 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 RPS27AP15-201ENST00000447672 466 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 RPL7P31-201ENST00000450192 724 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 RPS6P2-201ENST00000454208 705 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AC090013.1-201ENST00000485147 480 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AC231760.1-201ENST00000498002 260 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 VTA1P2-201ENST00000520205 911 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 CIR1P1-201ENST00000524055 1133 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AC022882.1-201ENST00000532142 501 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.13□□□□□ -1.75
NIPAL3Q6P499 OR4U1P-201ENST00000554958 912 ntBASIC4.13□□□□□ -1.75
NIPAL3Q6P499 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms