Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 Y_RNA.77-201ENST00000362962 107 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 RNA5SP391-201ENST00000363456 119 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 MIR130A-201ENST00000385274 89 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 RNA5SP91-201ENST00000390902 119 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 RPL23AP29-201ENST00000397284 453 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 RPS3AP26-201ENST00000398259 784 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 CYCSP45-201ENST00000402289 315 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 RNU2-28P-201ENST00000410457 189 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 IPPKP1-201ENST00000422501 768 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC079807.1-201ENST00000429993 481 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 VDAC1P6-201ENST00000430062 855 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 HMGB3P24-201ENST00000433260 622 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC129850.1-201ENST00000436203 508 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 RPL12P11-201ENST00000439970 501 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AL596266.1-201ENST00000448132 400 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 TPTE2P5-203ENST00000458118 728 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 NXT1P1-201ENST00000458481 316 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 PPIAP21-201ENST00000464473 501 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC072039.1-201ENST00000477611 581 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 RPL32P33-201ENST00000487023 394 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 OR4G11P-201ENST00000492842 939 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC009120.1-201ENST00000493458 473 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 LTV1P1-201ENST00000510683 1237 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 RNU6-615P-201ENST00000516065 106 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC139365.2-201ENST00000517972 253 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 OR8G3P-201ENST00000533406 921 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AL121766.1-201ENST00000547436 487 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC090502.2-201ENST00000549267 280 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC090888.3-201ENST00000558917 509 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AC011260.1-201ENST00000578420 472 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AL031985.2-201ENST00000600955 480 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AF131215.7-201ENST00000602443 707 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 WISP1-OT1-201ENST00000602893 642 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AP001521.1-201ENST00000609150 300 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 PACRG-210ENST00000611387 279 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 PCMTD1P7-201ENST00000634506 357 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 PHKBP1-201ENST00000450951 1951 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 OR5BR1P-201ENST00000524992 1330 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 KYNUP3-201ENST00000574386 1341 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 ZNF37BP-203ENST00000452306 1352 ntBASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
CCDC144NLQ6NUI1 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 LINC01963-201ENST00000562038 3148 ntBASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 OR4A15-201ENST00000314706 1035 ntBASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 RNU6-500P-201ENST00000362349 107 ntBASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 RN7SKP149-201ENST00000363008 344 ntBASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 Y_RNA.201-201ENST00000364052 96 ntBASIC4.6□□□□□ -1.67
CCDC144NLQ6NUI1 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms