Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC087888.1-201ENST00000550884 1254 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC006130.2-201ENST00000586202 326 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC084373.1-201ENST00000603311 235 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC005034.4-201ENST00000603612 899 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AL353600.1-201ENST00000608148 251 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC099676.1-201ENST00000608886 657 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC015722.2-201ENST00000622210 551 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 AC007546.2-201ENST00000623996 360 ntBASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SHROOM1Q2M3G4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC107068.1-201ENST00000563286 4218 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC000374.1-201ENST00000434698 1745 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC114546.3-201ENST00000623582 1734 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 RLIMP1-201ENST00000339626 1680 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 SNORD96B-201ENST00000386148 79 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 RNU6-603P-201ENST00000411403 107 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 RPL36AP10-201ENST00000421785 322 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 SNORA84-201ENST00000459229 133 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC108751.2-201ENST00000469993 231 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 MIR2116-201ENST00000517221 80 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 NPM1P35-201ENST00000533043 868 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 RN7SL703P-201ENST00000578485 302 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 AC007423.1-201ENST00000605009 627 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 FAM91A3P-201ENST00000456826 2544 ntBASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
SHROOM1Q2M3G4 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 ADNP-201ENST00000349014 5963 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 IQCB2P-201ENST00000401788 1633 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 RNU4-23P-201ENST00000362839 140 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 RNA5SP175-201ENST00000364275 119 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AL034403.1-201ENST00000399414 885 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 RPL21P65-201ENST00000406094 466 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AL590806.1-201ENST00000415818 853 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 C1DP3-201ENST00000455013 423 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 MTND6P6-201ENST00000478031 263 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AF213884.1-201ENST00000488102 463 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AL132838.2-201ENST00000492041 314 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 MTCYBP19-201ENST00000517463 1124 ntBASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC5.02□□□□□ -1.61
SHROOM1Q2M3G4 AC025175.1-201ENST00000606482 759 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms