Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 RNU6-1003P-201ENST00000517099 105 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDH1Q08174 OR4A12P-201ENST00000530847 918 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC093027.1-201ENST00000546698 429 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC023968.1-201ENST00000560719 475 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AC024255.1-201ENST00000614376 102 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AL158801.5-201ENST00000623123 465 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AP006248.2-201ENST00000623309 592 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AL645937.1-201ENST00000641739 1652 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 CASC19-284ENST00000642142 1868 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
PCDH1Q08174 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
PCDH1Q08174 AL355488.2-201ENST00000609909 2850 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.19□□□□□ -1.42
PCDH1Q08174 AL662795.2-201ENST00000624252 3706 ntBASIC6.19□□□□□ -1.42
PCDH1Q08174 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH1Q08174 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH1Q08174 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC005225.5-201ENST00000623547 2225 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH1Q08174 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDH1Q08174 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 RNU6-289P-201ENST00000364093 107 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 RNU1-84P-201ENST00000365447 164 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 MIR551B-201ENST00000384984 96 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC104297.1-201ENST00000393779 870 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 Z97832.1-201ENST00000402490 328 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 MIR1266-201ENST00000408125 84 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AL022237.1-201ENST00000446663 358 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AC044784.2-201ENST00000447297 366 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH1Q08174 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 AL445991.1-201ENST00000450381 475 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDH1Q08174 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH1Q08174 RPL7P6-201ENST00000480903 738 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 RN7SL502P-201ENST00000481857 290 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AC013356.1-201ENST00000489027 564 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AC023194.1-201ENST00000493084 308 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 NIPA2P2-201ENST00000496376 1083 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 MTND6P2-201ENST00000512226 524 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH1Q08174 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH1Q08174 HPRT1P3-201ENST00000539521 576 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH1Q08174 VN1R80P-201ENST00000597126 338 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AC036176.3-201ENST00000602456 418 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AC027243.2-201ENST00000602530 724 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC6.18□□□□□ -1.42
PCDH1Q08174 RMST_3.1-201ENST00000611651 109 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 AC005899.6-201ENST00000620729 297 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH1Q08174 CDRT1-208ENST00000630868 794 ntBASIC6.18□□□□□ -1.42
PCDH1Q08174 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.18□□□□□ -1.42
PCDH1Q08174 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.18□□□□□ -1.42
PCDH1Q08174 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
PCDH1Q08174 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms